Documents
Welcome to the collection of documents for Computational Morphometry Toolkit (CMTK).
Adding Documents: Members of Computational Morphometry Toolkit (CMTK) may submit documents to the folders below; however, an administrator will decide whether or not to publish a document.
Deleting Documents: If you find an out-dated document, please send a request to the tool/resource administrator.
Add New Document |
Folders/Documents | Add |
▼ Application Publications ( 23 ) | + |
Accelerated aging of selective brain structures in human immunodeficiency virus infection: a controlled, longitudinal magnetic resonance imaging study. Description: Pfefferbaum, Adolf, et al. Accelerated aging of selective brain structures in human immunodeficiency virus infection: a controlled, longitudinal magnetic resonance imaging study. ''Neurobiol Aging''. 2014 Jan 13; Updated: Mar 20, 2014 | |
A mechanism of rapidly reversible cerebral ventricular enlargement independent of tissue atrophy. Description: Zahr, Natalie M, et al. A mechanism of rapidly reversible cerebral ventricular enlargement independent of tissue atrophy. ''Neuropsychopharmacology''. 2013 May; '''38''' (6):1121-9 Updated: Mar 20, 2014 | |
A mutual information approach to automate identification of neuronal clusters in Drosophila brain images Updated: Jul 16, 2012 | |
Cerebral blood flow in posterior cortical nodes of the default mode network decreases with task engagement but remains higher than in most brain regions. Description: Pfefferbaum, Adolf, et al. Cerebral blood flow in posterior cortical nodes of the default mode network decreases with task engagement but remains higher than in most brain regions. ''Cereb Cortex''. 2011 Jan; '''21''' (1):233-44 Updated: Aug 22, 2011 | |
Chronic alcohol consumption and its effect on nodes of frontocerebellar and limbic circuitry: Comparison of effects in France and the United States. Description: Le Berre, Anne-Pascale, et al. Chronic alcohol consumption and its effect on nodes of frontocerebellar and limbic circuitry: Comparison of effects in France and the United States. ''Hum Brain Mapp''. 2014 Mar 17; Updated: Mar 20, 2014 | |
Combining atlas-based parcellation of regional brain data acquired across scanners at 1.5T and 3.0T field strengths Description: Pfefferbaum A, et al. Combining atlas-based parcellation of regional brain data acquired across scanners at 1.5T and 3.0T field strengths. ''Neuroimage''. 2012 Jan 26; Updated: Feb 3, 2012 | |
Developmental change in regional brain structure over 7 months in early adolescence: comparison of approaches for longitudinal atlas-based parcellation. Description: Sullivan, Edith V, et al. Developmental change in regional brain structure over 7 months in early adolescence: comparison of approaches for longitudinal atlas-based parcellation. ''Neuroimage''. 2011 Jul 1; '''57''' (1):214-24 Updated: Aug 22, 2011 | |
Independent contributions of cortical gray matter, aging, sex and alcoholism to K-complex amplitude evoked during sleep. Description: Colrain, Ian M, et al. Independent contributions of cortical gray matter, aging, sex and alcoholism to K-complex amplitude evoked during sleep. ''Sleep''. 2011 Jun; '''34''' (6):787-95 Updated: Aug 22, 2011 | |
In vivo glutamate measured with magnetic resonance spectroscopy: behavioral correlates in aging. Description: Zahr, Natalie M, et al. In vivo glutamate measured with magnetic resonance spectroscopy: behavioral correlates in aging. ''Neurobiol Aging''. 2013 Apr; '''34''' (4):1265-76 Updated: Mar 20, 2014 | |
Monkeys that Voluntarily and Chronically Drink Alcohol Damage their Brains: a Longitudinal MRI Study. Description: Kroenke, Christopher D, et al. Monkeys that Voluntarily and Chronically Drink Alcohol Damage their Brains: a Longitudinal MRI Study. ''Neuropsychopharmacology''. 2014 Mar; '''39''' (4):823-30 Updated: Mar 20, 2014 | |
MRI estimates of brain iron concentration in normal aging: comparison of field-dependent (FDRI) and phase (SWI) methods. Description: Pfefferbaum, Adolf, et al. MRI estimates of brain iron concentration in normal aging: comparison of field-dependent (FDRI) and phase (SWI) methods. ''Neuroimage''. 2009 Aug 15; '''47''' (2):493-500 Updated: Aug 22, 2011 | |
MRI estimates of brain iron concentration in normal aging using quantitative susceptibility mapping Description: Bilgic, Berkin, et al. MRI estimates of brain iron concentration in normal aging using quantitative susceptibility mapping. ''Neuroimage''. 2012 Feb 1; '''59''' (3):2625-35 Updated: Jan 12, 2012 | |
Rat strain differences in brain structure and neurochemistry in response to binge alcohol. Description: Zahr, Natalie M, et al. Rat strain differences in brain structure and neurochemistry in response to binge alcohol. ''Psychopharmacology (Berl)''. 2014 Jan; '''231''' (2):429-45 Updated: Mar 20, 2014 | |
Relevance of Iron Deposition in Deep Gray Matter Brain Structures to Cognitive and Motor Performance in Healthy Elderly Men and Women: Exploratory Findings. Description: Sullivan EV, et al. Relevance of Iron Deposition in Deep Gray Matter Brain Structures to Cognitive and Motor Performance in Healthy Elderly Men and Women: Exploratory Findings. ''Brain Imaging Behav''. 2009 Jun 1; '''3''' (2):167-175 Updated: Aug 22, 2011 | |
Sheet-like white matter fiber tracts: representation, clustering, and quantitative analysis Description: Maddah, Mahnaz, et al. Sheet-like white matter fiber tracts: representation, clustering, and quantitative analysis. ''Med Image Comput Comput Assist Interv''. 2011; '''14''' (Pt 2):191-9 Updated: Jan 12, 2012 | |
Thalamic volume deficit contributes to procedural and explicit memory impairment in HIV infection with primary alcoholism comorbidity. Description: Fama, Rosemary, et al. Thalamic volume deficit contributes to procedural and explicit memory impairment in HIV infection with primary alcoholism comorbidity. ''Brain Imaging Behav''. 2014 Jan 14; Updated: Mar 20, 2014 | |
The INIA19 Template and NeuroMaps Atlas for Primate Brain Image Parcellation and Spatial Normalization. Description: Rohlfing, Torsten, et al. The INIA19 Template and NeuroMaps Atlas for Primate Brain Image Parcellation and Spatial Normalization. ''Front Neuroinform''. 2012; '''6''': 27 Updated: Mar 20, 2014 | |
The Locust Standard Brain: A 3D Standard of the Central Complex as a Platform for Neural Network Analysis. Description: El Jundi, Basil, et al. The Locust Standard Brain: A 3D Standard of the Central Complex as a Platform for Neural Network Analysis. ''Front Syst Neurosci''. 2009; '''3''': 21 Updated: Aug 22, 2011 | |
The SRI24 multichannel atlas of normal adult human brain structure. Description: Rohlfing, Torsten, et al. The SRI24 multichannel atlas of normal adult human brain structure. ''Hum Brain Mapp''. 2010 May; '''31''' (5):798-819 Updated: Aug 22, 2011 | |
Variation in longitudinal trajectories of regional brain volumes of healthy men and women (ages 10 to 85 years) measured with atlas-based parcellation of MRI. Description: Pfefferbaum, Adolf, et al. Variation in longitudinal trajectories of regional brain volumes of healthy men and women (ages 10 to 85 years) measured with atlas-based parcellation of MRI. ''Neuroimage''. 2013 Jan 15; '''65''': 176-93 Updated: Mar 20, 2014 | |
Visual search and the aging brain: discerning the effects of age-related brain volume shrinkage on alertness, feature binding, and attentional control Description: Muller-Oehring, Eva M, et al. Visual search and the aging brain: discerning the effects of age-related brain volume shrinkage on alertness, feature binding, and attentional control. ''Neuropsychology''. 2013 Jan; '''27''' (1):48-59 Updated: Jun 4, 2013 | |
Volumetric cerebral perfusion imaging in healthy adults: regional distribution, laterality, and repeatability of pulsed continuous arterial spin labeling (PCASL). Description: Pfefferbaum, Adolf, et al. Volumetric cerebral perfusion imaging in healthy adults: regional distribution, laterality, and repeatability of pulsed continuous arterial spin labeling (PCASL). ''Psychiatry Res''. 2010 Jun 30; '''182''' (3):266-73 Updated: Aug 22, 2011 | |
Whole-Brain Activity Maps Reveal Stereotyped, Distributed Networks for Visuomotor Behavior Updated: Mar 20, 2014 | |
► Developer Documentation ( 2 ) | + |
► Technical Publications ( 4 ) | + |
► User Documentation ( 3 ) | + |