user-forum > Upload whs-sd-atlas to zenodo in a different format ?
Showing 1-4 of 4 posts
Display:
Results per page:
Nov 1, 2021  12:11 PM | Nicolas Chiaruttini
Upload whs-sd-atlas to zenodo in a different format ?
Hello!

I am developing a section to atlas registration tool (https://biop.github.io/ijp-imagetoatlas/). So far this tool is only compatible with the Mouse Allen Brain atlas CCfv3. I would like to make it compatible with other atlases, in particular with a Rat atlas.

To make this convenient in ImageJ / Fiji, I need to convert the current whs-sd data to a multiresolution file format, and also, ideally, I'd like to make the reformated data accessible in Zenodo, a bit like what I did for the CCFv3 (https://zenodo.org/record/4486659#.YX_gZ...).

Is this allowed and ok for you ? I will follow the citation policy you provide (https://www.nitrc.org/citation/?group_id...)

Of course if you find that I do not acknowledge you properly, please let me know and I will edit the text in the Zenodo record.

Please let me know if that's possible.

Best regards,

Nicolas
Nov 1, 2021  04:11 PM | Eszter Agnes Papp
RE: Upload whs-sd-atlas to zenodo in a different format ?
Dear Nicolas,

We are happy to hear that you are interested in the Waxholm Space atlas of the Sprague Dawley Rat Brain. Please feel free to re-share the atlas on Zenodo in the format you need, just remember to follow our citation policy.

Best of luck with your development,
Eszter
Nov 1, 2021  09:11 PM | Nicolas Chiaruttini
RE: Upload whs-sd-atlas to zenodo in a different format ?
Thank you very much! Sure I will follow the citation policy and also post the link here when it's done.
Nov 7, 2024  12:11 PM | Nicolas Chiaruttini
RE: Upload whs-sd-atlas to zenodo in a different format ?

Oups, I forgot to put the link. Here it is:


https://zenodo.org/records/8092060