PubMed Mentions
The links below are to publications on PubMed referring to Waxholm Space Atlas of the Sprague Dawley Rat Brain. This list is gathered weekly from PubMed automatically.
| Publication/References | |
| 3D Reconstructed Cyto-, Muscarinic M2 Receptor, and Fiber Architecture of the Rat Brain Registered to the Waxholm Space Atlas. Description: Schubert, Nicole, et al. 3D Reconstructed Cyto-, Muscarinic M2 Receptor, and Fiber Architecture of the Rat Brain Registered to the Waxholm Space Atlas. ''Front Neuroanat''. 2016; '''10''': 51 | |
| Quantitative Susceptibility Mapping-Based Microscopy of Magnetic Resonance Venography (QSM-mMRV) for In Vivo Morphologically and Functionally Assessing Cerebromicrovasculature in Rat Stroke Model. Description: Hsieh, Meng-Chi, et al. Quantitative Susceptibility Mapping-Based Microscopy of Magnetic Resonance Venography (QSM-mMRV) for In Vivo Morphologically and Functionally Assessing Cerebromicrovasculature in Rat Stroke Model. ''PLoS One''. 2016; '''11''' (3):e0149602 | |
| Uptake and retention of manganese contrast agents for PET and MRI in the rodent brain. Description: Brunnquell, Christina L, et al. Uptake and retention of manganese contrast agents for PET and MRI in the rodent brain. ''Contrast Media Mol Imaging''. 2016 Sep; '''11''' (5):371-380 | |
| Longitudinal magnetic resonance imaging reveals striatal hypertrophy in a rat model of long-term stimulant treatment. Description: Biezonski, D, et al. Longitudinal magnetic resonance imaging reveals striatal hypertrophy in a rat model of long-term stimulant treatment. ''Transl Psychiatry''. 2016 Sep 6; '''6''' (9):e884 | |
| Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas. Description: Dempsey, Bowen, et al. Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas. ''Front Neural Circuits''. 2017; '''11''': 9 | |
| Investigating hyperoxic effects in the rat brain using quantitative susceptibility mapping based on MRI phase. Description: Hsieh, Meng-Chi, et al. Investigating hyperoxic effects in the rat brain using quantitative susceptibility mapping based on MRI phase. ''Magn Reson Med''. 2017 Feb; '''77''' (2):592-602 | |
| Dorsal root ganglion stimulation attenuates the BOLD signal response to noxious sensory input in specific brain regions: Insights into a possible mechanism for analgesia. Description: Pawela, Christopher P, et al. Dorsal root ganglion stimulation attenuates the BOLD signal response to noxious sensory input in specific brain regions: Insights into a possible mechanism for analgesia. ''Neuroimage''. 2017 Feb 15; '''147''': 10-18 | |
| Differentiation of the Infarct Core from Ischemic Penumbra within the First 4.5 Hours, Using Diffusion Tensor Imaging-Derived Metrics: A Rat Model. Description: Kuo, Duen-Pang, et al. Differentiation of the Infarct Core from Ischemic Penumbra within the First 4.5 Hours, Using Diffusion Tensor Imaging-Derived Metrics: A Rat Model. ''Korean J Radiol''. 2017 Mar-Apr; '''18''' (2):269-278 | |
| Connecting imaging mass spectrometry and magnetic resonance imaging-based anatomical atlases for automated anatomical interpretation and differential analysis. Description: Verbeeck, Nico, et al. Connecting imaging mass spectrometry and magnetic resonance imaging-based anatomical atlases for automated anatomical interpretation and differential analysis. ''Biochim Biophys Acta Proteins Proteom''. 2017 Jul; '''1865''' (7):967-977 | |
| RNA-seq analyses reveal that cervical spinal cords and anterior motor neurons from amyotrophic lateral sclerosis subjects show reduced expression of mitochondrial DNA-encoded respiratory genes, and rhTFAM may correct this respiratory deficiency. Description: Ladd, Amy C, et al. RNA-seq analyses reveal that cervical spinal cords and anterior motor neurons from amyotrophic lateral sclerosis subjects show reduced expression of mitochondrial DNA-encoded respiratory genes, and rhTFAM may correct this respiratory deficiency. ''Brain Res''. 2017 Jul 15; '''1667''': 74-83 | |
| The rat corticospinal system is functionally and anatomically segregated. Description: Olivares-Moreno, Rafael, et al. The rat corticospinal system is functionally and anatomically segregated. ''Brain Struct Funct''. 2017 Dec; '''222''' (9):3945-3958 | |
| Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. Description: Osen, Kirsten K, et al. Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. ''Neuroimage''. 2019 Oct 1; '''199''': 38-56 | |
| The SIGMA rat brain templates and atlases for multimodal MRI data analysis and visualization. Description: Barriere, D A, et al. The SIGMA rat brain templates and atlases for multimodal MRI data analysis and visualization. ''Nat Commun''. 2019 Dec 13; '''10''' (1):5699 | |
| Database of literature derived cellular measurements from the murine basal ganglia. Description: Bjerke, Ingvild E, et al. Database of literature derived cellular measurements from the murine basal ganglia. ''Sci Data''. 2020 Jul 6; '''7''' (1):211 | |
| Early, Intense Rehabilitation Fails to Improve Outcome After Intra-Striatal Hemorrhage in Rats. Description: Fedor, Britt A, et al. Early, Intense Rehabilitation Fails to Improve Outcome After Intra-Striatal Hemorrhage in Rats. ''Neurorehabil Neural Repair''. 2022 Dec; '''36''' (12):788-799 | |
| Histological E-data Registration in rodent Brain Spaces. Description: Fuglstad, Jingyi Guo, et al. Histological E-data Registration in rodent Brain Spaces. ''Elife''. 2023 Jan 13; '''12''': | |
| Are standing osmotic gradients the main driver of cerebrospinal fluid production? A computational analysis. Description: Razzaghi Khamesi, Pooya, et al. Are standing osmotic gradients the main driver of cerebrospinal fluid production? A computational analysis. ''Fluids Barriers CNS''. 2023 Mar 13; '''20''' (1):18 | |
| A Timm-Nissl multiplane microscopic atlas of rat brain zincergic terminal fields and metal-containing glia. Description: Blixhavn, Camilla H, et al. A Timm-Nissl multiplane microscopic atlas of rat brain zincergic terminal fields and metal-containing glia. ''Sci Data''. 2023 Mar 21; '''10''' (1):150 | |
| Spike-based coupling between single neurons and populations across rat sensory cortices, perirhinal cortex, and hippocampus. Description: Dorman, Reinder, et al. Spike-based coupling between single neurons and populations across rat sensory cortices, perirhinal cortex, and hippocampus. ''Cereb Cortex''. 2023 Jun 20; '''33''' (13):8247-8264 | |
| AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures. Description: Kleven, Heidi, et al. AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures. ''Sci Data''. 2023 Jul 26; '''10''' (1):486 | |
| The efferent connections of the orbitofrontal, posterior parietal, and insular cortex of the rat brain. Description: Reiten, Ingrid, et al. The efferent connections of the orbitofrontal, posterior parietal, and insular cortex of the rat brain. ''Sci Data''. 2023 Sep 21; '''10''' (1):645 | |
| Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration. Description: Kleven, Heidi, et al. Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration. ''Nat Methods''. 2023 Nov; '''20''' (11):1822-1829 | |
| The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases. Description: Blixhavn, Camilla H, et al. The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases. ''Front Neuroinform''. 2024; '''18''': 1284107 | |
| Oxytocin-induced birth causes sex-specific behavioral and brain connectivity changes in developing rat offspring. Description: Giri, Tusar, et al. Oxytocin-induced birth causes sex-specific behavioral and brain connectivity changes in developing rat offspring. ''iScience''. 2024 Feb 16; '''27''' (2):108960 | |
| Development and advancements in rodent MRI-based brain atlases. Description: Ma, Xiaoyi, et al. Development and advancements in rodent MRI-based brain atlases. ''Heliyon''. 2024 Mar 30; '''10''' (6):e27421 | |
| Comparison of basal ganglia regions across murine brain atlases using metadata models and the Waxholm Space. Description: Kleven, H, et al. Comparison of basal ganglia regions across murine brain atlases using metadata models and the Waxholm Space. ''Sci Data''. 2024 Sep 27; '''11''' (1):1036 |