help > RE: error horzcat CONN toolbox
Dec 16, 2014  03:12 AM | Alfonso Nieto-Castanon - Boston University
RE: error horzcat CONN toolbox
Hi Chase,

Yes, the ROI-to-ROI connectivity matrices for each subject are stored in the files conn_*/results/firstlevel/ANALYSIS_01/resultsROI_Subject#_Condition#.mat. They are also aggregated across all subjects in the files conn_*/results/firstlevel/ANALYSIS_01/resultsROI_Subject#_Condition#.mat. (in these files the variable 'Z' contains the Fisher transformed correlations between each source and target ROI, the list of source ROIs is in 'names' and the list of target ROIs is in 'names2')

Hope this helps
Alfonso

Originally posted by Chase Dougherty:
It appears you are correct. That file has a flat time series upon examination. But the original 4D volume appears to be normal. This dataset was preprocessed in FSL using FEAT (without bandpass filtering) and smoothed. The other subjects appear normal. You've been very helpful I really appreciate it. I have one unrelated question....does conn output an actual connectivity matrix for each subject? I am unable to find where this is stored if it is the case.



Thanks!

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Chase Dec 11, 2014
Chase Dec 12, 2014
Alfonso Nieto-Castanon Dec 12, 2014
Chase Dec 12, 2014
Alfonso Nieto-Castanon Dec 12, 2014
Chase Dec 15, 2014
RE: error horzcat CONN toolbox
Alfonso Nieto-Castanon Dec 16, 2014
Alfonso Nieto-Castanon Dec 12, 2014