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help > RE: Error importing SPM.mat file
Dec 23, 2014 04:12 AM | Xiaozhen You
RE: Error importing SPM.mat file
Hi Alfonso,
Sorry to bother you again :)
I finally got the con_importspm to work to import 2 sessions per subject, and also setting different session condition with different name using the script you sent to me, but now it gave me the following error (I updated the conn to p version now)
Warning: Contents.m overloaded by version in folder /data/apps/spm/8/toolbox/TOM8
SOME ERROR FOUNDS!: Please revise the Setup information
ERROR: Subject 1 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
...
...
CONN: RUNNING PREPROCESSING STEP
Step 2/7: Importing conditions/covariates
100.0% (Subject 88 Session 2)
Not ready to process step conn_process_5
CONN: RUNNING ANALYSIS STEP
Error using conn_process (line 1431)
Some conditions have not been processed yet. Re-run
previous step
Error in conn_process (line 19)
case 'analyses', disp(['CONN: RUNNING
ANALYSIS STEP']);
conn_process([9,10:13,15],varargin{:});
Error in conn_batch (line 617)
conn_process('Analyses',batch.Analysis.analysis_number);
Error in BatchScript_withexcel_Connallfields_spm (line
228)
conn_batch(batch);
I"m attaching the conn_mat file, and also the script I wrote to run the batch. Not sure what I did wrong.
Thanks again for debugging it for me!
Xiaozhen
Sorry to bother you again :)
I finally got the con_importspm to work to import 2 sessions per subject, and also setting different session condition with different name using the script you sent to me, but now it gave me the following error (I updated the conn to p version now)
Warning: Contents.m overloaded by version in folder /data/apps/spm/8/toolbox/TOM8
SOME ERROR FOUNDS!: Please revise the Setup information
ERROR: Subject 1 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 1 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 2 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 3 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 4 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition nonsal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition noresp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition resp_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
ERROR: Subject 5 does not have any scan associated with condition sal_Session1_Session1_Session1_Session1_Session1_Session1_Session1_Session1
...
...
CONN: RUNNING PREPROCESSING STEP
Step 2/7: Importing conditions/covariates
100.0% (Subject 88 Session 2)
Not ready to process step conn_process_5
CONN: RUNNING ANALYSIS STEP
Error using conn_process (line 1431)
Some conditions have not been processed yet. Re-run
previous step
Error in conn_process (line 19)
case 'analyses', disp(['CONN: RUNNING
ANALYSIS STEP']);
conn_process([9,10:13,15],varargin{:});
Error in conn_batch (line 617)
conn_process('Analyses',batch.Analysis.analysis_number);
Error in BatchScript_withexcel_Connallfields_spm (line
228)
conn_batch(batch);
I"m attaching the conn_mat file, and also the script I wrote to run the batch. Not sure what I did wrong.
Thanks again for debugging it for me!
Xiaozhen
Threaded View
Title | Author | Date |
---|---|---|
Xiaozhen You | Nov 25, 2014 | |
Xiaozhen You | Nov 26, 2014 | |
Alfonso Nieto-Castanon | Nov 27, 2014 | |
Xiaozhen You | Dec 9, 2014 | |
Alfonso Nieto-Castanon | Dec 10, 2014 | |
Alfonso Nieto-Castanon | Dec 10, 2014 | |
Xiaozhen You | Dec 10, 2014 | |
Alfonso Nieto-Castanon | Dec 12, 2014 | |
Xiaozhen You | Dec 23, 2014 | |
Xiaozhen You | Dec 23, 2014 | |
Alfonso Nieto-Castanon | Dec 24, 2014 | |
Xiaozhen You | Dec 31, 2014 | |
Alfonso Nieto-Castanon | Dec 31, 2014 | |
Xiaozhen You | Jan 1, 2015 | |
Alfonso Nieto-Castanon | Jan 1, 2015 | |
Xiaozhen You | Jan 2, 2015 | |
Alfonso Nieto-Castanon | Jan 3, 2015 | |
Xiaozhen You | Jan 5, 2015 | |
Xiaozhen You | Jan 6, 2015 | |
Alfonso Nieto-Castanon | Jan 15, 2015 | |
Xiaozhen You | Jan 15, 2015 | |
Xiaozhen You | Dec 17, 2014 | |
Xiaozhen You | Nov 27, 2014 | |
Alfonso Nieto-Castanon | Nov 26, 2014 | |