Hi Alfonso,

Thank you for the CONN toolbox - it is amazing! 

I was wondering if it is possible to do a Batch script that loads second level results and then saves/exports a mask image with specific p and cluster thresholds.

For example, I have seed-to-voxel results for many different seeds, and I would like to save/export a mask image with the results thresholded at p = .005, and cluster FDR corrected for each seed, for positive and negative contrasts separately. I was hoping there is a way of scripting this so I don't have to do each manually.

Please let me know if this is possible.

Thanks so much for your time!
Matt