Hi all,

I've run my conn batch script up to the 1st level analysis. When I look at the results, for both the denosing and 1st-Level analyses steps the brain template and the processing results in the preview are off (not aligned onto each other, please see file attached). The labeling of the brain regions seems to follow the processing results. When I run ROI-to-ROI analyses, the problem seems to be solved and the preview at the 2nd level shows me the ROIs where they are supposed to be in the brain template.

I'm using Conn 16.a, but this has occured also with previous versions (e.g., 15). Moreover, some months ago I ran similar analyses with another data set and had no such problem. I was wondering what this may depend on.

Any help would be appreciated.
Thank you!

Best,
Gabriele