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help > RE: Batch script
Jun 23, 2016 09:06 PM | Alfonso Nieto-Castanon - Boston University
RE: Batch script
Hi Sahil,
Sorry for the late reply. You may want to take a look at the code in conn_batch_workshop_nyudataset.m in your conn distribution folder for an example of a batch script that processes an entire dataset. In that code you may disregard the first half of it which deals with downloading and unzipping the NYU dataset and focus on the batch.* portions of it, which define the CONN project and the desired processing steps. For additional info on batch processing you may want to type "help conn_batch" in Matlab's command window, which will list all batch fields and corresponding options.
Hope this helps
Alfonso
Originally posted by Sahil Bajaj:
Sorry for the late reply. You may want to take a look at the code in conn_batch_workshop_nyudataset.m in your conn distribution folder for an example of a batch script that processes an entire dataset. In that code you may disregard the first half of it which deals with downloading and unzipping the NYU dataset and focus on the batch.* portions of it, which define the CONN project and the desired processing steps. For additional info on batch processing you may want to type "help conn_batch" in Matlab's command window, which will list all batch fields and corresponding options.
Hope this helps
Alfonso
Originally posted by Sahil Bajaj:
Hi,
I used this toolbox for preprocessing and calculating functional connectivity maps for 1 subject to test and the toolbox really works perfectly on every step.
I have a set of 130 subjects.
I was wondering how can I write a batch script for this so that I can process all the subjects together?
Thanks a lot for this wonderful toolbox.
Sahil
I used this toolbox for preprocessing and calculating functional connectivity maps for 1 subject to test and the toolbox really works perfectly on every step.
I have a set of 130 subjects.
I was wondering how can I write a batch script for this so that I can process all the subjects together?
Thanks a lot for this wonderful toolbox.
Sahil
Threaded View
| Title | Author | Date |
|---|---|---|
| Sahil Bajaj | Jun 9, 2016 | |
| Alfonso Nieto-Castanon | Jun 23, 2016 | |