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help > Error during Setup: importing ROI data
Sep 4, 2018 12:09 PM | Chabran Eléna
Error during Setup: importing ROI data
Dear experts,
When trying to run the Setup step in my connectivity analysis in Conn toolbox, an error occurs at "Step 5/7" while importing ROIs data. It reads as follows:
ERROR DESCRIPTION:
Error using spm_slice_vol
File too small.
Error in spm_read_vols (line 34)
Y(:,:,p,i) = spm_slice_vol(V(i),spm_matrix([0 0 p]),V(i).dim(1:2),0);
Error in conn_process (line 599)
X0=spm_read_vols(V0);
Error in conn_process (line 14)
case 'setup', disp(['CONN: RUNNING SETUP STEP']); conn_process([0:4,4.5,5]);
Error in conn (line 2999)
else conn_process('setup');
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.16.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2012b
storage: 248.0Gb available
It always occurs for the same subject (patient 18 out of 57), and when I remove this subject from the dataset the error now occurs for the next subject, so it doesn't seem to be dependent on the functional images. And I tried to run the analysis with 4D or 3D images, with the same result.
I also obtain the same error simply when clicking on the corresponding subject in the Setup window, in the "grey matter" or "white matter" section.
I am stuck and I hope someone can provide some useful advice!
Thank you in advance for your help
Eléna Chabran
When trying to run the Setup step in my connectivity analysis in Conn toolbox, an error occurs at "Step 5/7" while importing ROIs data. It reads as follows:
ERROR DESCRIPTION:
Error using spm_slice_vol
File too small.
Error in spm_read_vols (line 34)
Y(:,:,p,i) = spm_slice_vol(V(i),spm_matrix([0 0 p]),V(i).dim(1:2),0);
Error in conn_process (line 599)
X0=spm_read_vols(V0);
Error in conn_process (line 14)
case 'setup', disp(['CONN: RUNNING SETUP STEP']); conn_process([0:4,4.5,5]);
Error in conn (line 2999)
else conn_process('setup');
Error in conn_menumanager (line 119)
feval(CONN_MM.MENU{n0}.callback{n1}{1},CONN_MM.MENU{n0}.callback{n1}{2:end});
CONN v.16.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2012b
storage: 248.0Gb available
It always occurs for the same subject (patient 18 out of 57), and when I remove this subject from the dataset the error now occurs for the next subject, so it doesn't seem to be dependent on the functional images. And I tried to run the analysis with 4D or 3D images, with the same result.
I also obtain the same error simply when clicking on the corresponding subject in the Setup window, in the "grey matter" or "white matter" section.
I am stuck and I hope someone can provide some useful advice!
Thank you in advance for your help
Eléna Chabran
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Title | Author | Date |
---|---|---|
Chabran Eléna | Sep 4, 2018 | |
Johanna Martin | Sep 4, 2018 | |
Chabran Eléna | Sep 11, 2018 | |