help > Seed based but using R2R analysis type of plot?
Apr 26, 2024  06:04 AM | Renzo Torrecuso - Max Planck Institute for Human Cognitive and Brain Sciences
Seed based but using R2R analysis type of plot?

Dear Alfonso or CONN experts,
Running R2R I got this message below.


I understand that it is because I set only left caudate for the R2R analysis, which would actually be a seed based analysis. Is it possible to build this seed based with the same type of graph CONN offers for R2R analysis? 


Thanks a lot all best


Renzo


ERROR DESCRIPTION:
 
Subscript indices must either be real positive integers or logicals.


Error in conn_statsoptimalleaforder (line 136)
leftLeaves = getChildrenFromNode(Z(end,1));


Error in conn_displayroi>conn_displayroi_clusters (line 3868)
 idx=conn_statsoptimalleaforder(Z,Y0); %reference: Bar-Joseph, Z., Gifford, D.K., and Jaakkola, T.S. (2001). Fast optimal leaf ordering for hierarchical clustering. Bioinformatics 17, Suppl 1:S22?9. PMID: 11472989


Error in conn_displayroi (line 1985)
 data=conn_displayroi_clusters(data); 


Error in conn_displayroi (line 467)
 conn_displayroi(hfig,[],'displayreduced');


Error in conn_display (line 196)
 hfigure=conn_displayroi('initfile',fullfile(filepath,[filename,fileext]),varargin{:});


Error in conn (line 12333)
 if dodisp, fh=conn_display(fullfile(CONN_h.menus.m_results.design.pwd,'ROI.mat'),1); end


Error in conn (line 11474)
 conn gui_results_roiview;
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