open-discussion
open-discussion > shape mancova without spharm pdm
Jan 22, 2013 12:01 PM | Antonios Makropoulos
shape mancova without spharm pdm
Hi everyone and a happy new year,
I am trying to analyse the shape correlation of a structure with age. So far, I've run the SPHARM-PDM / MANCOVA pipeline successfully.
I would like to see what I get without the SPHARM-PDM parameterization.
For this purpose I aligned all of the surfaces with Procrustes alignment (rigid + affine) and projected the differences to a template using
MeshMath template surface_n.txt -subtract surface_n
as suggested in a previous thread.
Then I use the surface_n.txt files as input for the shape mancova using the following command:
shapeAnalysisMANCOVA data.csv --numGroupTypes 1 --numIndependent 1 --interactionTest --simpleCorrs --debug --KWMinput
The command works up to the point that is about to run the simple correlation testing.
Then I get a segmentation fault at line 28 of nonMancova.cxx
tempNorm=ArrayNormal->GetTuple(feat);
which suggests a problem with the meanSurfaceNormals.
I have downloaded/compiled the version of mancova in http://www.insight-journal.org/browse/pu...
Could you help me with that?
I am trying to analyse the shape correlation of a structure with age. So far, I've run the SPHARM-PDM / MANCOVA pipeline successfully.
I would like to see what I get without the SPHARM-PDM parameterization.
For this purpose I aligned all of the surfaces with Procrustes alignment (rigid + affine) and projected the differences to a template using
MeshMath template surface_n.txt -subtract surface_n
as suggested in a previous thread.
Then I use the surface_n.txt files as input for the shape mancova using the following command:
shapeAnalysisMANCOVA data.csv --numGroupTypes 1 --numIndependent 1 --interactionTest --simpleCorrs --debug --KWMinput
The command works up to the point that is about to run the simple correlation testing.
Then I get a segmentation fault at line 28 of nonMancova.cxx
tempNorm=ArrayNormal->GetTuple(feat);
which suggests a problem with the meanSurfaceNormals.
I have downloaded/compiled the version of mancova in http://www.insight-journal.org/browse/pu...
Could you help me with that?
Threaded View
Title | Author | Date |
---|---|---|
Antonios Makropoulos | Jan 22, 2013 | |
Beatriz Paniagua | Apr 19, 2013 | |