PubMed Mentions

The links below are to publications on PubMed referring to NiftyReg. This list is gathered weekly from PubMed automatically.

Publication/References
Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. Description: Cleary, Jon O, et al. Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. ''Neuroimage''. 2011 Jan 15; '''54''' (2):769-78
Brain MAPS: an automated, accurate and robust brain extraction technique using a template library. Description: Leung, Kelvin K, et al. Brain MAPS: an automated, accurate and robust brain extraction technique using a template library. ''Neuroimage''. 2011 Apr 1; '''55''' (3):1091-108
Image analysis and statistical inference in neuroimaging with R. Description: Tabelow, K, et al. Image analysis and statistical inference in neuroimaging with R. ''Neuroimage''. 2011 Apr 15; '''55''' (4):1686-93
LoAd: a locally adaptive cortical segmentation algorithm. Description: Cardoso, M Jorge, et al. LoAd: a locally adaptive cortical segmentation algorithm. ''Neuroimage''. 2011 Jun 1; '''56''' (3):1386-97
Automatic morphometry in Alzheimer's disease and mild cognitive impairment. Description: Heckemann, Rolf A, et al. Automatic morphometry in Alzheimer's disease and mild cognitive impairment. ''Neuroimage''. 2011 Jun 15; '''56''' (4):2024-37
A comparison of voxel and surface based cortical thickness estimation methods. Description: Clarkson, Matthew J, et al. A comparison of voxel and surface based cortical thickness estimation methods. ''Neuroimage''. 2011 Aug 1; '''57''' (3):856-65
Diffusion tensor imaging tractography to visualize the relationship of the optic radiation to epileptogenic lesions prior to neurosurgery. Description: Winston, Gavin P, et al. Diffusion tensor imaging tractography to visualize the relationship of the optic radiation to epileptogenic lesions prior to neurosurgery. ''Epilepsia''. 2011 Aug; '''52''' (8):1430-8
Evaluation of multi-modal, multi-site neuroimaging measures in Huntington's disease: Baseline results from the PADDINGTON study. Description: Hobbs, Nicola Z, et al. Evaluation of multi-modal, multi-site neuroimaging measures in Huntington's disease: Baseline results from the PADDINGTON study. ''Neuroimage Clin''. 2012; '''2''': 204-11
The importance of group-wise registration in tract based spatial statistics study of neurodegeneration: a simulation study in Alzheimer's disease. Description: Keihaninejad, Shiva, et al. The importance of group-wise registration in tract based spatial statistics study of neurodegeneration: a simulation study in Alzheimer's disease. ''PLoS One''. 2012; '''7''' (11):e45996
An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease. Description: Keihaninejad, Shiva, et al. An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease. ''Neuroimage''. 2013 May 15; '''72''': 153-63
Image registration of ex-vivo MRI to sparsely sectioned histology of hippocampal and neocortical temporal lobe specimens. Description: Goubran, Maged, et al. Image registration of ex-vivo MRI to sparsely sectioned histology of hippocampal and neocortical temporal lobe specimens. ''Neuroimage''. 2013 Dec; '''83''': 770-81
Brain volume estimation from post-mortem newborn and fetal MRI. Description: Orasanu, Eliza, et al. Brain volume estimation from post-mortem newborn and fetal MRI. ''Neuroimage Clin''. 2014; '''6''': 438-44
Test-Retest Reliability of Diffusion Tensor Imaging in Huntington's Disease. Description: Cole, James H, et al. Test-Retest Reliability of Diffusion Tensor Imaging in Huntington's Disease. ''PLoS Curr''. 2014 Mar 21; '''6''':
Preterm birth affects the developmental synergy between cortical folding and cortical connectivity observed on multimodal MRI. Description: Melbourne, Andrew, et al. Preterm birth affects the developmental synergy between cortical folding and cortical connectivity observed on multimodal MRI. ''Neuroimage''. 2014 Apr 1; '''89''': 23-34
Preventing visual field deficits from neurosurgery. Description: Winston, Gavin P, et al. Preventing visual field deficits from neurosurgery. ''Neurology''. 2014 Aug 12; '''83''' (7):604-11
Automatic segmentation and volumetry of multiple sclerosis brain lesions from MR images. Description: Jain, Saurabh, et al. Automatic segmentation and volumetry of multiple sclerosis brain lesions from MR images. ''Neuroimage Clin''. 2015; '''8''': 367-75
Measuring brain atrophy with a generalized formulation of the boundary shift integral. Description: Prados, Ferran, et al. Measuring brain atrophy with a generalized formulation of the boundary shift integral. ''Neurobiol Aging''. 2015 Jan; '''36 Suppl 1''': S81-90
Predicting outcome in clinically isolated syndrome using machine learning. Description: Wottschel, V, et al. Predicting outcome in clinically isolated syndrome using machine learning. ''Neuroimage Clin''. 2015; '''7''': 281-7
Registration of in-vivo to ex-vivo MRI of surgically resected specimens: a pipeline for histology to in-vivo registration. Description: Goubran, Maged, et al. Registration of in-vivo to ex-vivo MRI of surgically resected specimens: a pipeline for histology to in-vivo registration. ''J Neurosci Methods''. 2015 Feb 15; '''241''': 53-65
The grey matter correlates of impaired decision-making in multiple sclerosis. Description: Muhlert, Nils, et al. The grey matter correlates of impaired decision-making in multiple sclerosis. ''J Neurol Neurosurg Psychiatry''. 2015 May; '''86''' (5):530-6
Accelerated vs. unaccelerated serial MRI based TBM-SyN measurements for clinical trials in Alzheimer's disease. Description: Vemuri, Prashanthi, et al. Accelerated vs. unaccelerated serial MRI based TBM-SyN measurements for clinical trials in Alzheimer's disease. ''Neuroimage''. 2015 Jun; '''113''': 61-9
Multi-contrast attenuation map synthesis for PET/MR scanners: assessment on FDG and Florbetapir PET tracers. Description: Burgos, Ninon, et al. Multi-contrast attenuation map synthesis for PET/MR scanners: assessment on FDG and Florbetapir PET tracers. ''Eur J Nucl Med Mol Imaging''. 2015 Aug; '''42''' (9):1447-58
Impaired Global and Regional Cerebral Perfusion in Newborns with Complex Congenital Heart Disease. Description: Nagaraj, Usha D, et al. Impaired Global and Regional Cerebral Perfusion in Newborns with Complex Congenital Heart Disease. ''J Pediatr''. 2015 Nov; '''167''' (5):1018-24
Selective vulnerability of Rich Club brain regions is an organizational principle of structural connectivity loss in Huntington's disease. Description: McColgan, Peter, et al. Selective vulnerability of Rich Club brain regions is an organizational principle of structural connectivity loss in Huntington's disease. ''Brain''. 2015 Nov; '''138''' (Pt 11):3327-44
Detailed volumetric analysis of the hypothalamus in behavioral variant frontotemporal dementia. Description: Bocchetta, Martina, et al. Detailed volumetric analysis of the hypothalamus in behavioral variant frontotemporal dementia. ''J Neurol''. 2015 Dec; '''262''' (12):2635-42
Rationale, design and methodology of the image analysis protocol for studies of patients with cerebral small vessel disease and mild stroke. Description: Valdes Hernandez, Maria Del C, et al. Rationale, design and methodology of the image analysis protocol for studies of patients with cerebral small vessel disease and mild stroke. ''Brain Behav''. 2015 Dec; '''5''' (12):e00415
Voxelwise atlas rating for computer assisted diagnosis: Application to congenital heart diseases of the great arteries. Description: Zuluaga, Maria A, et al. Voxelwise atlas rating for computer assisted diagnosis: Application to congenital heart diseases of the great arteries. ''Med Image Anal''. 2015 Dec; '''26''' (1):185-94
Classifying Glioblastoma Multiforme Follow-Up Progressive vs. Responsive Forms Using Multi-Parametric MRI Features. Description: Ion-Margineanu, Adrian, et al. Classifying Glioblastoma Multiforme Follow-Up Progressive vs. Responsive Forms Using Multi-Parametric MRI Features. ''Front Neurosci''. 2016; '''10''': 615
Fully-Automated muMRI Morphometric Phenotyping of the Tc1 Mouse Model of Down Syndrome. Description: Powell, Nick M, et al. Fully-Automated muMRI Morphometric Phenotyping of the Tc1 Mouse Model of Down Syndrome. ''PLoS One''. 2016; '''11''' (9):e0162974
Parcellation of the Healthy Neonatal Brain into 107 Regions Using Atlas Propagation through Intermediate Time Points in Childhood. Description: Blesa, Manuel, et al. Parcellation of the Healthy Neonatal Brain into 107 Regions Using Atlas Propagation through Intermediate Time Points in Childhood. ''Front Neurosci''. 2016; '''10''': 220
Persistent Impact of In utero Irradiation on Mouse Brain Structure and Function Characterized by MR Imaging and Behavioral Analysis. Description: Verreet, Tine, et al. Persistent Impact of In utero Irradiation on Mouse Brain Structure and Function Characterized by MR Imaging and Behavioral Analysis. ''Front Behav Neurosci''. 2016; '''10''': 83
Reliability of measuring regional callosal atrophy in neurodegenerative diseases. Description: Van Schependom, Jeroen, et al. Reliability of measuring regional callosal atrophy in neurodegenerative diseases. ''Neuroimage Clin''. 2016; '''12''': 825-831
Imaging the accumulation and suppression of tau pathology using multiparametric MRI. Description: Holmes, Holly E, et al. Imaging the accumulation and suppression of tau pathology using multiparametric MRI. ''Neurobiol Aging''. 2016 Mar; '''39''': 184-94
Accurate Learning with Few Atlases (ALFA): an algorithm for MRI neonatal brain extraction and comparison with 11 publicly available methods. Description: Serag, Ahmed, et al. Accurate Learning with Few Atlases (ALFA): an algorithm for MRI neonatal brain extraction and comparison with 11 publicly available methods. ''Sci Rep''. 2016 Mar 24; '''6''': 23470
MRI visual rating scales in the diagnosis of dementia: evaluation in 184 post-mortem confirmed cases. Description: Harper, Lorna, et al. MRI visual rating scales in the diagnosis of dementia: evaluation in 184 post-mortem confirmed cases. ''Brain''. 2016 Apr; '''139''' (Pt 4):1211-25
Characterizing spatiotemporal information loss in sparse-sampling-based dynamic MRI for monitoring respiration-induced tumor motion in radiotherapy. Description: Arai, Tatsuya J, et al. Characterizing spatiotemporal information loss in sparse-sampling-based dynamic MRI for monitoring respiration-induced tumor motion in radiotherapy. ''Med Phys''. 2016 Jun; '''43''' (6):2807-2820
NiftyFit: a Software Package for Multi-parametric Model-Fitting of 4D Magnetic Resonance Imaging Data. Description: Melbourne, Andrew, et al. NiftyFit: a Software Package for Multi-parametric Model-Fitting of 4D Magnetic Resonance Imaging Data. ''Neuroinformatics''. 2016 Jul; '''14''' (3):319-37
aMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data. Description: Niedworok, Christian J, et al. aMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data. ''Nat Commun''. 2016 Jul 7; '''7''': 11879
A multi-time-point modality-agnostic patch-based method for lesion filling in multiple sclerosis. Description: Prados, Ferran, et al. A multi-time-point modality-agnostic patch-based method for lesion filling in multiple sclerosis. ''Neuroimage''. 2016 Oct 1; '''139''': 376-384
Fully automated grey and white matter spinal cord segmentation. Description: Prados, Ferran, et al. Fully automated grey and white matter spinal cord segmentation. ''Sci Rep''. 2016 Oct 27; '''6''': 36151
Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views. Description: Wang, Guotai, et al. Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views. ''Med Image Anal''. 2016 Dec; '''34''': 137-147
Evaluating the effect of multiple sclerosis lesions on automatic brain structure segmentation. Description: Gonzalez-Villa, Sandra, et al. Evaluating the effect of multiple sclerosis lesions on automatic brain structure segmentation. ''Neuroimage Clin''. 2017; '''15''': 228-238
Quantitative assessment of the susceptibility artefact and its interaction with motion in diffusion MRI. Description: Graham, Mark S, et al. Quantitative assessment of the susceptibility artefact and its interaction with motion in diffusion MRI. ''PLoS One''. 2017; '''12''' (10):e0185647
Selection bias in the reported performances of AD classification pipelines. Description: Mendelson, Alex F, et al. Selection bias in the reported performances of AD classification pipelines. ''Neuroimage Clin''. 2017; '''14''': 400-416
White matter predicts functional connectivity in premanifest Huntington's disease. Description: McColgan, Peter, et al. White matter predicts functional connectivity in premanifest Huntington's disease. ''Ann Clin Transl Neurol''. 2017 Feb; '''4''' (2):106-118
Studying Brain Circuit Function with Dynamic Causal Modeling for Optogenetic fMRI. Description: Bernal-Casas, David, et al. Studying Brain Circuit Function with Dynamic Causal Modeling for Optogenetic fMRI. ''Neuron''. 2017 Feb 8; '''93''' (3):522-532.e5
Evaluation of a multi-atlas CT synthesis approach for MRI-only radiotherapy treatment planning. Description: Guerreiro, F, et al. Evaluation of a multi-atlas CT synthesis approach for MRI-only radiotherapy treatment planning. ''Phys Med''. 2017 Mar; '''35''': 7-17
Quantitative longitudinal imaging of activated microglia as a marker of inflammation in the pilocarpine rat model of epilepsy using [(11)C]-( R)-PK11195 PET and MRI. Description: Yankam Njiwa, J, et al. Quantitative longitudinal imaging of activated microglia as a marker of inflammation in the pilocarpine rat model of epilepsy using [(11)C]-( R)-PK11195 PET and MRI. ''J Cereb Blood Flow Metab''. 2017 Apr; '''37''' (4):1251-1263
Topological length of white matter connections predicts their rate of atrophy in premanifest Huntington's disease. Description: McColgan, Peter, et al. Topological length of white matter connections predicts their rate of atrophy in premanifest Huntington's disease. ''JCI Insight''. 2017 Apr 20; '''2''' (8):
Structural and functional brain network correlates of depressive symptoms in premanifest Huntington's disease. Description: McColgan, Peter, et al. Structural and functional brain network correlates of depressive symptoms in premanifest Huntington's disease. ''Hum Brain Mapp''. 2017 Jun; '''38''' (6):2819-2829
Iterative framework for the joint segmentation and CT synthesis of MR images: application to MRI-only radiotherapy treatment planning. Description: Burgos, Ninon, et al. Iterative framework for the joint segmentation and CT synthesis of MR images: application to MRI-only radiotherapy treatment planning. ''Phys Med Biol''. 2017 Jun 7; '''62''' (11):4237-4253
Automated T2 relaxometry of the hippocampus for temporal lobe epilepsy. Description: Winston, Gavin P, et al. Automated T2 relaxometry of the hippocampus for temporal lobe epilepsy. ''Epilepsia''. 2017 Sep; '''58''' (9):1645-1652
T2-Weighted 4D Magnetic Resonance Imaging for Application in Magnetic Resonance-Guided Radiotherapy Treatment Planning. Description: Freedman, Joshua N, et al. T2-Weighted 4D Magnetic Resonance Imaging for Application in Magnetic Resonance-Guided Radiotherapy Treatment Planning. ''Invest Radiol''. 2017 Oct; '''52''' (10):563-573
Tissue magnetic susceptibility mapping as a marker of tau pathology in Alzheimer's disease. Description: O'Callaghan, J, et al. Tissue magnetic susceptibility mapping as a marker of tau pathology in Alzheimer's disease. ''Neuroimage''. 2017 Oct 1; '''159''': 334-345
Patterns of atrophy in pathologically confirmed dementias: a voxelwise analysis. Description: Harper, Lorna, et al. Patterns of atrophy in pathologically confirmed dementias: a voxelwise analysis. ''J Neurol Neurosurg Psychiatry''. 2017 Nov; '''88''' (11):908-916
An experimental phantom study of the effect of gadolinium-based MR contrast agents on PET attenuation coefficients and PET quantification in PET-MR imaging: application to cardiac studies. Description: O' Doherty, Jim, et al. An experimental phantom study of the effect of gadolinium-based MR contrast agents on PET attenuation coefficients and PET quantification in PET-MR imaging: application to cardiac studies. ''EJNMMI Phys''. 2017 Dec; '''4''' (1):4
The effect of high count rates on cardiac perfusion quantification in a simultaneous PET-MR system using a cardiac perfusion phantom. Description: O' Doherty, Jim, et al. The effect of high count rates on cardiac perfusion quantification in a simultaneous PET-MR system using a cardiac perfusion phantom. ''EJNMMI Phys''. 2017 Dec 11; '''4''' (1):31
Active Acquisition for multimodal neuroimaging. Description: Cole, James H, et al. Active Acquisition for multimodal neuroimaging. ''Wellcome Open Res''. 2018; '''3''': 145
Classification of Alzheimer's and MCI Patients from Semantically Parcelled PET Images: A Comparison between AV45 and FDG-PET. Description: Nozadi, Seyed Hossein, et al. Classification of Alzheimer's and MCI Patients from Semantically Parcelled PET Images: A Comparison between AV45 and FDG-PET. ''Int J Biomed Imaging''. 2018; '''2018''': 1247430
Diffusion MRI tractography for improved transcranial MRI-guided focused ultrasound thalamotomy targeting for essential tremor. Description: Tian, Qiyuan, et al. Diffusion MRI tractography for improved transcranial MRI-guided focused ultrasound thalamotomy targeting for essential tremor. ''Neuroimage Clin''. 2018; '''19''': 572-580
Evaluation of methods for volumetric analysis of pediatric brain data: The childmetrix pipeline versus adult-based approaches. Description: Phan, Thanh Van, et al. Evaluation of methods for volumetric analysis of pediatric brain data: The childmetrix pipeline versus adult-based approaches. ''Neuroimage Clin''. 2018; '''19''': 734-744
Identification of Two Distinct Working Memory-Related Brain Networks in Healthy Young Adults. Description: Egli, Tobias, et al. Identification of Two Distinct Working Memory-Related Brain Networks in Healthy Young Adults. ''eNeuro''. 2018 Jan-Feb; '''5''' (1):
Subdivisions of the posteromedial cortex in disorders of consciousness. Description: Cui, Yue, et al. Subdivisions of the posteromedial cortex in disorders of consciousness. ''Neuroimage Clin''. 2018; '''20''': 260-266
Subject-specific multi-poroelastic model for exploring the risk factors associated with the early stages of Alzheimer's disease. Description: Guo, Liwei, et al. Subject-specific multi-poroelastic model for exploring the risk factors associated with the early stages of Alzheimer's disease. ''Interface Focus''. 2018 Feb 6; '''8''' (1):20170019
Automatic segmentation of stereoelectroencephalography (SEEG) electrodes post-implantation considering bending. Description: Granados, Alejandro, et al. Automatic segmentation of stereoelectroencephalography (SEEG) electrodes post-implantation considering bending. ''Int J Comput Assist Radiol Surg''. 2018 Jun; '''13''' (6):935-946
Improved quantitation and reproducibility in multi-PET/CT lung studies by combining CT information. Description: Holman, Beverley F, et al. Improved quantitation and reproducibility in multi-PET/CT lung studies by combining CT information. ''EJNMMI Phys''. 2018 Jun 5; '''5''' (1):14
Genetic study of multimodal imaging Alzheimer's disease progression score implicates novel loci. Description: Scelsi, Marzia A, et al. Genetic study of multimodal imaging Alzheimer's disease progression score implicates novel loci. ''Brain''. 2018 Jul 1; '''141''' (7):2167-2180
Changes in brain architecture are consistent with altered fear processing in domestic rabbits. Description: Brusini, Irene, et al. Changes in brain architecture are consistent with altered fear processing in domestic rabbits. ''Proc Natl Acad Sci U S A''. 2018 Jul 10; '''115''' (28):7380-7385
Geometric and dosimetric evaluations of atlas-based segmentation methods of MR images in the head and neck region. Description: Kieselmann, J P, et al. Geometric and dosimetric evaluations of atlas-based segmentation methods of MR images in the head and neck region. ''Phys Med Biol''. 2018 Jul 11; '''63''' (14):145007
Interplay between spinal cord and cerebral cortex metabolism in amyotrophic lateral sclerosis. Description: Marini, Cecilia, et al. Interplay between spinal cord and cerebral cortex metabolism in amyotrophic lateral sclerosis. ''Brain''. 2018 Aug 1; '''141''' (8):2272-2279
Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections. Description: Iglesias, Juan Eugenio, et al. Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections. ''Med Image Anal''. 2018 Dec; '''50''': 127-144
Super-resolution T2-weighted 4D MRI for image guided radiotherapy. Description: Freedman, Joshua N, et al. Super-resolution T2-weighted 4D MRI for image guided radiotherapy. ''Radiother Oncol''. 2018 Dec; '''129''' (3):486-493
Default Mode Network Structural Integrity and Cerebellar Connectivity Predict Information Processing Speed Deficit in Multiple Sclerosis. Description: Savini, Giovanni, et al. Default Mode Network Structural Integrity and Cerebellar Connectivity Predict Information Processing Speed Deficit in Multiple Sclerosis. ''Front Cell Neurosci''. 2019; '''13''': 21
Mapping regional strain in anesthetised healthy subjects during spontaneous ventilation. Description: Cruces, Pablo, et al. Mapping regional strain in anesthetised healthy subjects during spontaneous ventilation. ''BMJ Open Respir Res''. 2019; '''6''' (1):e000423
Non-linear registration improves statistical power to detect hippocampal atrophy in aging and dementia. Description: Bartel, F, et al. Non-linear registration improves statistical power to detect hippocampal atrophy in aging and dementia. ''Neuroimage Clin''. 2019; '''23''': 101902
Processing Pipeline for Atlas-Based Imaging Data Analysis of Structural and Functional Mouse Brain MRI (AIDAmri). Description: Pallast, Niklas, et al. Processing Pipeline for Atlas-Based Imaging Data Analysis of Structural and Functional Mouse Brain MRI (AIDAmri). ''Front Neuroinform''. 2019; '''13''': 42
The histone deacetylase inhibitor nicotinamide exacerbates neurodegeneration in the lactacystin rat model of Parkinson's disease. Description: Harrison, Ian F, et al. The histone deacetylase inhibitor nicotinamide exacerbates neurodegeneration in the lactacystin rat model of Parkinson's disease. ''J Neurochem''. 2019 Jan; '''148''' (1):136-156
The Shared and Distinct White Matter Networks Between Drug-Naive Patients With Obsessive-Compulsive Disorder and Schizophrenia. Description: Qin, Jiaolong, et al. The Shared and Distinct White Matter Networks Between Drug-Naive Patients With Obsessive-Compulsive Disorder and Schizophrenia. ''Front Neurosci''. 2019; '''13''': 96
White matter hyperintensities in progranulin-associated frontotemporal dementia: A longitudinal GENFI study. Description: Sudre, Carole H, et al. White matter hyperintensities in progranulin-associated frontotemporal dementia: A longitudinal GENFI study. ''Neuroimage Clin''. 2019; '''24''': 102077
Spatial patterns of white matter hyperintensities associated with Alzheimer's disease risk factors in a cognitively healthy middle-aged cohort. Description: Salvado, Gemma, et al. Spatial patterns of white matter hyperintensities associated with Alzheimer's disease risk factors in a cognitively healthy middle-aged cohort. ''Alzheimers Res Ther''. 2019 Jan 24; '''11''' (1):12
MRI Relaxometry for Quantitative Analysis of USPIO Uptake in Cerebral Small Vessel Disease. Description: Thrippleton, Michael J, et al. MRI Relaxometry for Quantitative Analysis of USPIO Uptake in Cerebral Small Vessel Disease. ''Int J Mol Sci''. 2019 Feb 12; '''20''' (3):
Respiratory- and cardiac motion-corrected simultaneous whole-heart PET and dual phase coronary MR angiography. Description: Munoz, Camila, et al. Respiratory- and cardiac motion-corrected simultaneous whole-heart PET and dual phase coronary MR angiography. ''Magn Reson Med''. 2019 Mar; '''81''' (3):1671-1684
The effect of low resolution and coverage on the accuracy of susceptibility mapping. Description: Karsa, Anita, et al. The effect of low resolution and coverage on the accuracy of susceptibility mapping. ''Magn Reson Med''. 2019 Mar; '''81''' (3):1833-1848
A protocol for precise comparisons of small vessel disease lesions between ex vivo magnetic resonance imaging and histopathology. Description: Humphreys, Catherine A, et al. A protocol for precise comparisons of small vessel disease lesions between ex vivo magnetic resonance imaging and histopathology. ''Int J Stroke''. 2019 Apr; '''14''' (3):310-320
A statistical atlas of cerebral arteries generated using multi-center MRA datasets from healthy subjects. Description: Mouches, Pauline, et al. A statistical atlas of cerebral arteries generated using multi-center MRA datasets from healthy subjects. ''Sci Data''. 2019 Apr 11; '''6''' (1):29
Association of bone mineral density and fat fraction with magnetic susceptibility in inflamed trabecular bone. Description: Bray, Timothy J P, et al. Association of bone mineral density and fat fraction with magnetic susceptibility in inflamed trabecular bone. ''Magn Reson Med''. 2019 May; '''81''' (5):3094-3107
Supervised Domain Adaptation for Automatic Sub-cortical Brain Structure Segmentation with Minimal User Interaction. Description: Kushibar, Kaisar, et al. Supervised Domain Adaptation for Automatic Sub-cortical Brain Structure Segmentation with Minimal User Interaction. ''Sci Rep''. 2019 May 1; '''9''' (1):6742
The in vivo timeline of differentiation of engrafted human neural progenitor cells. Description: Vogel, Stefanie, et al. The in vivo timeline of differentiation of engrafted human neural progenitor cells. ''Stem Cell Res''. 2019 May; '''37''': 101429
Synthetic 4D-CT of the thorax for treatment plan adaptation on MR-guided radiotherapy systems. Description: Freedman, Joshua N, et al. Synthetic 4D-CT of the thorax for treatment plan adaptation on MR-guided radiotherapy systems. ''Phys Med Biol''. 2019 May 23; '''64''' (11):115005
Automatic Quantification of Computed Tomography Features in Acute Traumatic Brain Injury. Description: Jain, Saurabh, et al. Automatic Quantification of Computed Tomography Features in Acute Traumatic Brain Injury. ''J Neurotrauma''. 2019 Jun; '''36''' (11):1794-1803
3D whole brain segmentation using spatially localized atlas network tiles. Description: Huo, Yuankai, et al. 3D whole brain segmentation using spatially localized atlas network tiles. ''Neuroimage''. 2019 Jul 1; '''194''': 105-119
An alternative approach to contrast-enhanced imaging: diffusion-weighted imaging and T1-weighted imaging identifies and quantifies necrosis in Wilms tumour. Description: Rogers, Harriet J, et al. An alternative approach to contrast-enhanced imaging: diffusion-weighted imaging and T1-weighted imaging identifies and quantifies necrosis in Wilms tumour. ''Eur Radiol''. 2019 Aug; '''29''' (8):4141-4149
Tractography-based parcellation does not provide strong evidence of anatomical organisation within the thalamus. Description: Clayden, Jonathan D, et al. Tractography-based parcellation does not provide strong evidence of anatomical organisation within the thalamus. ''Neuroimage''. 2019 Oct 1; '''199''': 418-426
Investigating the oxygenation of brain arteriovenous malformations using quantitative susceptibility mapping. Description: Biondetti, Emma, et al. Investigating the oxygenation of brain arteriovenous malformations using quantitative susceptibility mapping. ''Neuroimage''. 2019 Oct 1; '''199''': 440-453
Dynamic single-slice CT estimates whole-lung dual-energy CT variables in pigs with and without experimental lung injury. Description: Cronin, John N, et al. Dynamic single-slice CT estimates whole-lung dual-energy CT variables in pigs with and without experimental lung injury. ''Intensive Care Med Exp''. 2019 Nov 1; '''7''' (1):59
Longitudinal structural connectomic and rich-club analysis in adolescent mTBI reveals persistent, distributed brain alterations acutely through to one year post-injury. Description: Chung, Ai Wern, et al. Longitudinal structural connectomic and rich-club analysis in adolescent mTBI reveals persistent, distributed brain alterations acutely through to one year post-injury. ''Sci Rep''. 2019 Dec 11; '''9''' (1):18833
Accurate MR Image Registration to Anatomical Reference Space for Diffuse Glioma. Description: Visser, Martin, et al. Accurate MR Image Registration to Anatomical Reference Space for Diffuse Glioma. ''Front Neurosci''. 2020; '''14''': 585
Classification and Graphical Analysis of Alzheimer's Disease and Its Prodromal Stage Using Multimodal Features From Structural, Diffusion, and Functional Neuroimaging Data and the APOE Genotype. Description: Gupta, Yubraj, et al. Classification and Graphical Analysis of Alzheimer's Disease and Its Prodromal Stage Using Multimodal Features From Structural, Diffusion, and Functional Neuroimaging Data and the APOE Genotype. ''Front Aging Neurosci''. 2020; '''12''': 238
MRI diffusion and perfusion alterations in the mesencephalon and pons as markers of disease and symptom reversibility in idiopathic normal pressure hydrocephalus. Description: Agerskov, Simon, et al. MRI diffusion and perfusion alterations in the mesencephalon and pons as markers of disease and symptom reversibility in idiopathic normal pressure hydrocephalus. ''PLoS One''. 2020; '''15''' (10):e0240327
Hippocampal profiling: Localized magnetic resonance imaging volumetry and T2 relaxometry for hippocampal sclerosis. Description: Vos, Sjoerd B, et al. Hippocampal profiling: Localized magnetic resonance imaging volumetry and T2 relaxometry for hippocampal sclerosis. ''Epilepsia''. 2020 Feb; '''61''' (2):297-309
Single-Cell Analysis of Foxp1-Driven Mechanisms Essential for Striatal Development. Description: Anderson, Ashley G, et al. Single-Cell Analysis of Foxp1-Driven Mechanisms Essential for Striatal Development. ''Cell Rep''. 2020 Mar 3; '''30''' (9):3051-3066.e7
Spinal cord hypermetabolism extends to skeletal muscle in amyotrophic lateral sclerosis: a computational approach to [18F]-fluorodeoxyglucose PET/CT images. Description: Bauckneht, Matteo, et al. Spinal cord hypermetabolism extends to skeletal muscle in amyotrophic lateral sclerosis: a computational approach to [18F]-fluorodeoxyglucose PET/CT images. ''EJNMMI Res''. 2020 Mar 23; '''10''' (1):23
Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. Description: Prados, Ferran, et al. Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. ''Neuroimage''. 2020 Apr 1; '''209''': 116489
White matter hyperintensities mediate gray matter volume and processing speed relationship in cognitively unimpaired participants. Description: Brugulat-Serrat, Anna, et al. White matter hyperintensities mediate gray matter volume and processing speed relationship in cognitively unimpaired participants. ''Hum Brain Mapp''. 2020 Apr 1; '''41''' (5):1309-1322
Automated White Matter Hyperintensity Segmentation Using Bayesian Model Selection: Assessment and Correlations with Cognitive Change. Description: Fiford, Cassidy M, et al. Automated White Matter Hyperintensity Segmentation Using Bayesian Model Selection: Assessment and Correlations with Cognitive Change. ''Neuroinformatics''. 2020 Jun; '''18''' (3):429-449
Predictors of Lesion Cavitation After Recent Small Subcortical Stroke. Description: Gattringer, Thomas, et al. Predictors of Lesion Cavitation After Recent Small Subcortical Stroke. ''Transl Stroke Res''. 2020 Jun; '''11''' (3):402-411
Analysis of brain atrophy and local gene expression in genetic frontotemporal dementia. Description: Altmann, Andre, et al. Analysis of brain atrophy and local gene expression in genetic frontotemporal dementia. ''Brain Commun''. 2020 Jul; '''2''' (2):
Evaluation of MRI-derived surrogate signals to model respiratory motion. Description: Tran, Elena H, et al. Evaluation of MRI-derived surrogate signals to model respiratory motion. ''Biomed Phys Eng Express''. 2020 Jul; '''6''' (4):045015
Automated computation and analysis of accuracy metrics in stereoencephalography. Description: Granados, Alejandro, et al. Automated computation and analysis of accuracy metrics in stereoencephalography. ''J Neurosci Methods''. 2020 Jul 1; '''340''': 108710
Machine learning assisted DSC-MRI radiomics as a tool for glioma classification by grade and mutation status. Description: Sudre, Carole H, et al. Machine learning assisted DSC-MRI radiomics as a tool for glioma classification by grade and mutation status. ''BMC Med Inform Decis Mak''. 2020 Jul 6; '''20''' (1):149
Progression of regional lung strain and heterogeneity in lung injury: assessing the evolution under spontaneous breathing and mechanical ventilation. Description: Hurtado, Daniel E, et al. Progression of regional lung strain and heterogeneity in lung injury: assessing the evolution under spontaneous breathing and mechanical ventilation. ''Ann Intensive Care''. 2020 Aug 6; '''10''' (1):107
A multimodal computational pipeline for 3D histology of the human brain. Description: Mancini, Matteo, et al. A multimodal computational pipeline for 3D histology of the human brain. ''Sci Rep''. 2020 Aug 14; '''10''' (1):13839
Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising. Description: Grussu, Francesco, et al. Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising. ''Neuroimage''. 2020 Aug 15; '''217''': 116884
Measuring cortical mean diffusivity to assess early microstructural cortical change in presymptomatic familial Alzheimer's disease. Description: Weston, Philip S J, et al. Measuring cortical mean diffusivity to assess early microstructural cortical change in presymptomatic familial Alzheimer's disease. ''Alzheimers Res Ther''. 2020 Sep 17; '''12''' (1):112
AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. Description: Coupe, Pierrick, et al. AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. ''Neuroimage''. 2020 Oct 1; '''219''': 117026
Patterns of white matter hyperintensities associated with cognition in middle-aged cognitively healthy individuals. Description: Brugulat-Serrat, Anna, et al. Patterns of white matter hyperintensities associated with cognition in middle-aged cognitively healthy individuals. ''Brain Imaging Behav''. 2020 Oct; '''14''' (5):2012-2023
Impact of small residual setup errors after image guidance on heart dose and survival in non-small cell lung cancer treated with curative-intent radiotherapy. Description: Johnson-Hart, Corinne, et al. Impact of small residual setup errors after image guidance on heart dose and survival in non-small cell lung cancer treated with curative-intent radiotherapy. ''Radiother Oncol''. 2020 Nov; '''152''': 177-182
Axon diameter index estimation independent of fiber orientation distribution using high-gradient diffusion MRI. Description: Fan, Qiuyun, et al. Axon diameter index estimation independent of fiber orientation distribution using high-gradient diffusion MRI. ''Neuroimage''. 2020 Nov 15; '''222''': 117197
A Contrast Augmentation Approach to Improve Multi-Scanner Generalization in MRI. Description: Meyer, Maria Ines, et al. A Contrast Augmentation Approach to Improve Multi-Scanner Generalization in MRI. ''Front Neurosci''. 2021; '''15''': 708196
Application of modern neuroimaging technology in the diagnosis and study of Alzheimer's disease. Description: Zeng, Hong-Mei, et al. Application of modern neuroimaging technology in the diagnosis and study of Alzheimer's disease. ''Neural Regen Res''. 2021 Jan; '''16''' (1):73-79
Lacunar Stroke Lesion Extent and Location and White Matter Hyperintensities Evolution 1 Year Post-lacunar Stroke. Description: Valdes Hernandez, Maria Del C, et al. Lacunar Stroke Lesion Extent and Location and White Matter Hyperintensities Evolution 1 Year Post-lacunar Stroke. ''Front Neurol''. 2021; '''12''': 640498
Post-stroke Cognition at 1 and 3 Years Is Influenced by the Location of White Matter Hyperintensities in Patients With Lacunar Stroke. Description: Valdes Hernandez, Maria Del C, et al. Post-stroke Cognition at 1 and 3 Years Is Influenced by the Location of White Matter Hyperintensities in Patients With Lacunar Stroke. ''Front Neurol''. 2021; '''12''': 634460
Presumed small vessel disease, imaging and cognition markers in the Alzheimer's Disease Neuroimaging Initiative. Description: Fiford, Cassidy M, et al. Presumed small vessel disease, imaging and cognition markers in the Alzheimer's Disease Neuroimaging Initiative. ''Brain Commun''. 2021; '''3''' (4):fcab226
Transductive Transfer Learning for Domain Adaptation in Brain Magnetic Resonance Image Segmentation. Description: Kushibar, Kaisar, et al. Transductive Transfer Learning for Domain Adaptation in Brain Magnetic Resonance Image Segmentation. ''Front Neurosci''. 2021; '''15''': 608808
Utility of Multi-Modal MRI for Differentiating of Parkinson's Disease and Progressive Supranuclear Palsy Using Machine Learning. Description: Talai, Aron S, et al. Utility of Multi-Modal MRI for Differentiating of Parkinson's Disease and Progressive Supranuclear Palsy Using Machine Learning. ''Front Neurol''. 2021; '''12''': 648548
Brain network reorganisation and spatial lesion distribution in systemic lupus erythematosus. Description: Valdes Hernandez, Maria Del C, et al. Brain network reorganisation and spatial lesion distribution in systemic lupus erythematosus. ''Lupus''. 2021 Feb; '''30''' (2):285-298
Early anterior cingulate involvement is seen in presymptomatic MAPT P301L mutation carriers. Description: Clarke, Mica T M, et al. Early anterior cingulate involvement is seen in presymptomatic MAPT P301L mutation carriers. ''Alzheimers Res Ther''. 2021 Feb 10; '''13''' (1):42
Motion compensated whole-heart coronary cardiovascular magnetic resonance angiography using focused navigation (fNAV). Description: Roy, Christopher W, et al. Motion compensated whole-heart coronary cardiovascular magnetic resonance angiography using focused navigation (fNAV). ''J Cardiovasc Magn Reson''. 2021 Mar 29; '''23''' (1):33
Brain region volumes and their relationship with disability progression and cognitive function in primary progressive multiple sclerosis. Description: Perez-Miralles, Francisco Carlos, et al. Brain region volumes and their relationship with disability progression and cognitive function in primary progressive multiple sclerosis. ''Brain Behav''. 2021 Apr; '''11''' (4):e02044
Combined Atlas and Convolutional Neural Network-Based Segmentation of the Hippocampus from MRI According to the ADNI Harmonized Protocol. Description: Nobakht, Samaneh, et al. Combined Atlas and Convolutional Neural Network-Based Segmentation of the Hippocampus from MRI According to the ADNI Harmonized Protocol. ''Sensors (Basel)''. 2021 Apr 1; '''21''' (7):
A deep learning algorithm for 3D cell detection in whole mouse brain image datasets. Description: Tyson, Adam L, et al. A deep learning algorithm for 3D cell detection in whole mouse brain image datasets. ''PLoS Comput Biol''. 2021 May; '''17''' (5):e1009074
Automated Prediction of Ischemic Brain Tissue Fate from Multiphase Computed Tomographic Angiography in Patients with Acute Ischemic Stroke Using Machine Learning. Description: Qiu, Wu, et al. Automated Prediction of Ischemic Brain Tissue Fate from Multiphase Computed Tomographic Angiography in Patients with Acute Ischemic Stroke Using Machine Learning. ''J Stroke''. 2021 May; '''23''' (2):234-243
In Silico Ventilation Within the Dose-Volume is Predictive of Lung Function Post-radiation Therapy in Patients with Lung Cancer. Description: Dong, Yu, et al. In Silico Ventilation Within the Dose-Volume is Predictive of Lung Function Post-radiation Therapy in Patients with Lung Cancer. ''Ann Biomed Eng''. 2021 May; '''49''' (5):1416-1431
Patient-specific prediction of SEEG electrode bending for stereotactic neurosurgical planning. Description: Granados, Alejandro, et al. Patient-specific prediction of SEEG electrode bending for stereotactic neurosurgical planning. ''Int J Comput Assist Radiol Surg''. 2021 May; '''16''' (5):789-798
Atlas construction and spatial normalisation to facilitate radiation-induced late effects research in childhood cancer. Description: Veiga, Catarina, et al. Atlas construction and spatial normalisation to facilitate radiation-induced late effects research in childhood cancer. ''Phys Med Biol''. 2021 May 4; '''66''' (10):
Uncertainty analysis of MR-PET image registration for precision neuro-PET imaging. Description: Markiewicz, Pawel J, et al. Uncertainty analysis of MR-PET image registration for precision neuro-PET imaging. ''Neuroimage''. 2021 May 15; '''232''': 117821
Improved cortical surface reconstruction using sub-millimeter resolution MPRAGE by image denoising. Description: Tian, Qiyuan, et al. Improved cortical surface reconstruction using sub-millimeter resolution MPRAGE by image denoising. ''Neuroimage''. 2021 Jun; '''233''': 117946
Rapid 4D-MRI reconstruction using a deep radial convolutional neural network: Dracula. Description: Freedman, Joshua N, et al. Rapid 4D-MRI reconstruction using a deep radial convolutional neural network: Dracula. ''Radiother Oncol''. 2021 Jun; '''159''': 209-217
Brain microstructural and metabolic alterations detected in vivo at onset of the first demyelinating event. Description: Collorone, Sara, et al. Brain microstructural and metabolic alterations detected in vivo at onset of the first demyelinating event. ''Brain''. 2021 Jun 22; '''144''' (5):1409-1421
Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast. Description: Iglesias, Juan Eugenio, et al. Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast. ''Neuroimage''. 2021 Aug 15; '''237''': 118206
A multichannel feature-based approach for longitudinal lung CT registration in the presence of radiation induced lung damage. Description: Stavropoulou, A, et al. A multichannel feature-based approach for longitudinal lung CT registration in the presence of radiation induced lung damage. ''Phys Med Biol''. 2021 Aug 27; '''66''' (17):
Structural brain dynamics across reading development: A longitudinal MRI study from kindergarten to grade 5. Description: Phan, Thanh Van, et al. Structural brain dynamics across reading development: A longitudinal MRI study from kindergarten to grade 5. ''Hum Brain Mapp''. 2021 Oct 1; '''42''' (14):4497-4509
Quantification of volumetric morphometry and optical property in the cortex of human cerebellum at micrometer resolution. Description: Liu, Chao J, et al. Quantification of volumetric morphometry and optical property in the cortex of human cerebellum at micrometer resolution. ''Neuroimage''. 2021 Dec 1; '''244''': 118627
Quantity versus quality: Age-related differences in muscle volume, intramuscular fat, and mechanical properties in the triceps surae. Description: Pinel, Sabrina, et al. Quantity versus quality: Age-related differences in muscle volume, intramuscular fat, and mechanical properties in the triceps surae. ''Exp Gerontol''. 2021 Dec; '''156''': 111594
B Cells in the CNS at Postmortem Are Associated With Worse Outcome and Cell Types in Multiple Sclerosis. Description: Moccia, Marcello, et al. B Cells in the CNS at Postmortem Are Associated With Worse Outcome and Cell Types in Multiple Sclerosis. ''Neurol Neuroimmunol Neuroinflamm''. 2022 Jan; '''9''' (1):
Magnetic susceptibility anisotropy in normal appearing white matter in multiple sclerosis from single-orientation acquisition. Description: Sibgatulin, Renat, et al. Magnetic susceptibility anisotropy in normal appearing white matter in multiple sclerosis from single-orientation acquisition. ''Neuroimage Clin''. 2022; '''35''': 103059
Timing of selective basal ganglia white matter loss in premanifest Huntington's disease. Description: Zeun, Paul, et al. Timing of selective basal ganglia white matter loss in premanifest Huntington's disease. ''Neuroimage Clin''. 2022 Jan 6; '''33''': 102927
Accurate determination of marker location within whole-brain microscopy images. Description: Tyson, Adam L, et al. Accurate determination of marker location within whole-brain microscopy images. ''Sci Rep''. 2022 Jan 18; '''12''' (1):867
Longitudinal thalamic white and grey matter changes associated with visual hallucinations in Parkinson's disease. Description: Zarkali, Angeliki, et al. Longitudinal thalamic white and grey matter changes associated with visual hallucinations in Parkinson's disease. ''J Neurol Neurosurg Psychiatry''. 2022 Feb; '''93''' (2):169-179
Disrupted Cacna1c gene expression perturbs spontaneous Ca(2+) activity causing abnormal brain development and increased anxiety. Description: Smedler, Erik, et al. Disrupted Cacna1c gene expression perturbs spontaneous Ca(2+) activity causing abnormal brain development and increased anxiety. ''Proc Natl Acad Sci U S A''. 2022 Feb 15; '''119''' (7):
Comparison of an in-house hybrid DIR method to NiftyReg on CBCT and CT images for head and neck cancer. Description: Jiang, Chunling, et al. Comparison of an in-house hybrid DIR method to NiftyReg on CBCT and CT images for head and neck cancer. ''J Appl Clin Med Phys''. 2022 Mar; '''23''' (3):e13540
Evaluating different methods of MR-based motion correction in simultaneous PET/MR using a head phantom moved by a robotic system. Description: Einspanner, Eric, et al. Evaluating different methods of MR-based motion correction in simultaneous PET/MR using a head phantom moved by a robotic system. ''EJNMMI Phys''. 2022 Mar 3; '''9''' (1):15
Validation of an MRI-only planning workflow for definitive pelvic radiotherapy. Description: O'Connor, Laura M, et al. Validation of an MRI-only planning workflow for definitive pelvic radiotherapy. ''Radiat Oncol''. 2022 Mar 18; '''17''' (1):55
DIR-based models to predict weekly anatomical changes in head and neck cancer proton therapy. Description: Zhang, Ying, et al. DIR-based models to predict weekly anatomical changes in head and neck cancer proton therapy. ''Phys Med Biol''. 2022 Apr 15; '''67''' (9):
Impact of deformable registration methods for prediction of recurrence free survival response to neoadjuvant chemotherapy in breast cancer: Results from the ISPY 1/ACRIN 6657 trial. Description: Thakran, Snekha, et al. Impact of deformable registration methods for prediction of recurrence free survival response to neoadjuvant chemotherapy in breast cancer: Results from the ISPY 1/ACRIN 6657 trial. ''Transl Oncol''. 2022 Jun; '''20''': 101411
*Myocardial T1, T2, T2, and fat fraction quantification via low-rank motion-corrected cardiac MR fingerprinting.** Description: Lima da Cruz, Gastao Jose, et al. Myocardial T1, T2, T2*, and fat fraction quantification via low-rank motion-corrected cardiac MR fingerprinting. ''Magn Reson Med''. 2022 Jun; '''87''' (6):2757-2774
The frontal aslant tract and its role in executive functions: a quantitative tractography study in glioma patients. Description: Landers, Maud J F, et al. The frontal aslant tract and its role in executive functions: a quantitative tractography study in glioma patients. ''Brain Imaging Behav''. 2022 Jun; '''16''' (3):1026-1039
Image registration and subtraction in dynamic magnetic resonance lymphangiography (MRL) of the legs. Description: Mills, Michael, et al. Image registration and subtraction in dynamic magnetic resonance lymphangiography (MRL) of the legs. ''BJR Case Rep''. 2022 Jul 1; '''8''' (4):20210237
Higher-resolution quantification of white matter hypointensities by large-scale transfer learning from 2D images on the JPSC-AD cohort. Description: Thyreau, Benjamin, et al. Higher-resolution quantification of white matter hypointensities by large-scale transfer learning from 2D images on the JPSC-AD cohort. ''Hum Brain Mapp''. 2022 Sep; '''43''' (13):3998-4012
Volumetric analysis of the piriform cortex in temporal lobe epilepsy. Description: Iqbal, Sabahat, et al. Volumetric analysis of the piriform cortex in temporal lobe epilepsy. ''Epilepsy Res''. 2022 Sep; '''185''': 106971
Development of a vendor neutral MRI distortion quality assurance workflow. Description: Walker, Amy, et al. Development of a vendor neutral MRI distortion quality assurance workflow. ''J Appl Clin Med Phys''. 2022 Oct; '''23''' (10):e13735
Two fully automated data-driven 3D whole-breast segmentation strategies in MRI for MR-based breast density using image registration and U-Net with a focus on reproducibility. Description: Ying, Jia, et al. Two fully automated data-driven 3D whole-breast segmentation strategies in MRI for MR-based breast density using image registration and U-Net with a focus on reproducibility. ''Vis Comput Ind Biomed Art''. 2022 Oct 11; '''5''' (1):25
Acute corticospinal tract diffusion tensor imaging predicts 6-month functional outcome after intracerebral haemorrhage. Description: Schwarz, G, et al. Acute corticospinal tract diffusion tensor imaging predicts 6-month functional outcome after intracerebral haemorrhage. ''J Neurol''. 2022 Nov; '''269''' (11):6058-6066
Multi-echo quantitative susceptibility mapping: how to combine echoes for accuracy and precision at 3 Tesla. Description: Biondetti, Emma, et al. Multi-echo quantitative susceptibility mapping: how to combine echoes for accuracy and precision at 3 Tesla. ''Magn Reson Med''. 2022 Nov; '''88''' (5):2101-2116
Quantitative evaluation of a deep learning-based framework to generate whole-body attenuation maps using LSO background radiation in long axial FOV PET scanners. Description: Sari, Hasan, et al. Quantitative evaluation of a deep learning-based framework to generate whole-body attenuation maps using LSO background radiation in long axial FOV PET scanners. ''Eur J Nucl Med Mol Imaging''. 2022 Nov; '''49''' (13):4490-4502
Rate of Retinal Layer Thinning as a Biomarker for Conversion to Progressive Disease in Multiple Sclerosis. Description: El Ayoubi, Nabil K, et al. Rate of Retinal Layer Thinning as a Biomarker for Conversion to Progressive Disease in Multiple Sclerosis. ''Neurol Neuroimmunol Neuroinflamm''. 2022 Nov; '''9''' (6):
Pre-treatment analysis of non-rigid variations can assist robust intensity-modulated proton therapy plan selection for head and neck patients. Description: Zhang, Ying, et al. Pre-treatment analysis of non-rigid variations can assist robust intensity-modulated proton therapy plan selection for head and neck patients. ''Med Phys''. 2022 Dec; '''49''' (12):7683-7693
ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. Description: Hernandez Petzsche, Moritz R, et al. ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. ''Sci Data''. 2022 Dec 10; '''9''' (1):762
Free-running 3D whole-heart T(1) and T(2) mapping and cine MRI using low-rank reconstruction with non-rigid cardiac motion correction. Description: Phair, Andrew, et al. Free-running 3D whole-heart T(1) and T(2) mapping and cine MRI using low-rank reconstruction with non-rigid cardiac motion correction. ''Magn Reson Med''. 2023 Jan; '''89''' (1):217-232
Effects of bolus injection duration on perfusion estimates in dynamic CT and dynamic susceptibility contrast MRI. Description: Arvidsson, Jonathan, et al. Effects of bolus injection duration on perfusion estimates in dynamic CT and dynamic susceptibility contrast MRI. ''MAGMA''. 2023 Feb; '''36''' (1):95-106
Relationship between paramagnetic rim lesions and slowly expanding lesions in multiple sclerosis. Description: Calvi, Alberto, et al. Relationship between paramagnetic rim lesions and slowly expanding lesions in multiple sclerosis. ''Mult Scler''. 2023 Mar; '''29''' (3):352-362
Single-heartbeat cardiac cine imaging via jointly regularized nonrigid motion-corrected reconstruction. Description: Cruz, Gastao, et al. Single-heartbeat cardiac cine imaging via jointly regularized nonrigid motion-corrected reconstruction. ''NMR Biomed''. 2023 Mar 30; '''36''' (9):e4942
Aberrant olfactory network functional connectivity in people with olfactory dysfunction following COVID-19 infection: an exploratory, observational study. Description: Wingrove, Jed, et al. Aberrant olfactory network functional connectivity in people with olfactory dysfunction following COVID-19 infection: an exploratory, observational study. ''EClinicalMedicine''. 2023 Apr; '''58''': 101883
Frequency-specific gaze modulation of emotional face processing in the human amygdala. Description: Guex, Raphael, et al. Frequency-specific gaze modulation of emotional face processing in the human amygdala. ''Cereb Cortex''. 2023 Apr 4; '''33''' (8):4859-4869
Feasibility of in vivo multi-parametric quantitative magnetic resonance imaging of the healthy sciatic nerve with a unified signal readout protocol. Description: Boonsuth, Ratthaporn, et al. Feasibility of in vivo multi-parametric quantitative magnetic resonance imaging of the healthy sciatic nerve with a unified signal readout protocol. ''Sci Rep''. 2023 Apr 21; '''13''' (1):6565
A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. Description: Iglesias, Juan Eugenio. A ready-to-use machine learning tool for symmetric multi-modality registration of brain MRI. ''Sci Rep''. 2023 Apr 24; '''13''' (1):6657
Whole-brain diffusion tensor imaging predicts 6-month functional outcome in acute intracerebral haemorrhage. Description: Schwarz, G, et al. Whole-brain diffusion tensor imaging predicts 6-month functional outcome in acute intracerebral haemorrhage. ''J Neurol''. 2023 May; '''270''' (5):2640-2648
Extensive T1-weighted MRI Preprocessing Improves Generalizability of Deep Brain Age Prediction Models. Description: Dular, Lara, et al. Extensive T1-weighted MRI Preprocessing Improves Generalizability of Deep Brain Age Prediction Models. ''bioRxiv''. 2023 May 10;
Tau accumulation in autosomal dominant Alzheimer's disease: a longitudinal [(18)F]flortaucipir study. Description: O'Connor, Antoinette, et al. Tau accumulation in autosomal dominant Alzheimer's disease: a longitudinal [(18)F]flortaucipir study. ''Alzheimers Res Ther''. 2023 May 25; '''15''' (1):99
Image guidance and interfractional anatomical variation in paediatric abdominal radiotherapy. Description: Taylor, Sabrina, et al. Image guidance and interfractional anatomical variation in paediatric abdominal radiotherapy. ''Br J Radiol''. 2023 Jun 1; '''96''' (1146):20230058
Isotoxic dose escalated radiotherapy for glioblastoma based on diffusion-weighted MRI and tumor control probability-an in-silico study. Description: Pang, Yaru, et al. Isotoxic dose escalated radiotherapy for glioblastoma based on diffusion-weighted MRI and tumor control probability-an in-silico study. ''Br J Radiol''. 2023 Jun 1; '''96''' (1146):20220384
Assessing informative tract segmentation and nTMS for pre-operative planning. Description: Lucena, Oeslle, et al. Assessing informative tract segmentation and nTMS for pre-operative planning. ''J Neurosci Methods''. 2023 Aug 1; '''396''': 109933
Extent of piriform cortex resection in children with temporal lobe epilepsy. Description: Piper, Rory J, et al. Extent of piriform cortex resection in children with temporal lobe epilepsy. ''Ann Clin Transl Neurol''. 2023 Sep; '''10''' (9):1613-1622
Subregional analysis of striatum iron in Parkinson's disease and rapid eye movement sleep behaviour disorder. Description: Alushaj, Erind, et al. Subregional analysis of striatum iron in Parkinson's disease and rapid eye movement sleep behaviour disorder. ''Neuroimage Clin''. 2023 Sep 28; '''40''': 103519
Quantitative susceptibility mapping identifies hippocampal and other subcortical grey matter tissue composition changes in temporal lobe epilepsy. Description: Kiersnowski, Oliver C, et al. Quantitative susceptibility mapping identifies hippocampal and other subcortical grey matter tissue composition changes in temporal lobe epilepsy. ''Hum Brain Mapp''. 2023 Oct 15; '''44''' (15):5047-5064
Diffusion MRI of the facial-vestibulocochlear nerve complex: a prospective clinical validation study. Description: Shapey, Jonathan, et al. Diffusion MRI of the facial-vestibulocochlear nerve complex: a prospective clinical validation study. ''Eur Radiol''. 2023 Nov; '''33''' (11):8067-8076
Quantitative magnetic resonance imaging reflects different levels of histologically determined myelin densities in multiple sclerosis, including remyelination in inactive multiple sclerosis lesions. Description: Wiggermann, Vanessa, et al. Quantitative magnetic resonance imaging reflects different levels of histologically determined myelin densities in multiple sclerosis, including remyelination in inactive multiple sclerosis lesions. ''Brain Pathol''. 2023 Nov; '''33''' (6):e13150
Unsupervised deep learning registration model for multimodal brain images. Description: Abbasi, Samaneh, et al. Unsupervised deep learning registration model for multimodal brain images. ''J Appl Clin Med Phys''. 2023 Nov; '''24''' (11):e14177
Subject-Specific Automatic Reconstruction of White Matter Tracts. Description: Meesters, Stephan, et al. Subject-Specific Automatic Reconstruction of White Matter Tracts. ''J Digit Imaging''. 2023 Dec; '''36''' (6):2648-2661
Three-dimensional histology reveals dissociable human hippocampal long axis gradients of Alzheimer's pathology. Description: Ortega-Cruz, Diana, et al. Three-dimensional histology reveals dissociable human hippocampal long axis gradients of Alzheimer's pathology. ''bioRxiv''. 2023 Dec 7;
Deep learning for automatic segmentation of vestibular schwannoma: a retrospective study from multi-center routine MRI. Description: Kujawa, Aaron, et al. Deep learning for automatic segmentation of vestibular schwannoma: a retrospective study from multi-center routine MRI. ''Front Comput Neurosci''. 2024; '''18''': 1365727
Sex and age effects on gray matter volume trajectories in young children with prenatal alcohol exposure. Description: Long, Madison, et al. Sex and age effects on gray matter volume trajectories in young children with prenatal alcohol exposure. ''Front Hum Neurosci''. 2024; '''18''': 1379959
Similarity-driven motion-resolved reconstruction for ferumoxytol-enhanced whole-heart MRI in congenital heart disease. Description: Romanin, Ludovica, et al. Similarity-driven motion-resolved reconstruction for ferumoxytol-enhanced whole-heart MRI in congenital heart disease. ''PLoS One''. 2024; '''19''' (6):e0304612
Treatment reduces the incidence of newly appearing multiple sclerosis lesions evolving into chronic active, slowly expanding lesions: A retrospective analysis. Description: Calvi, Alberto, et al. Treatment reduces the incidence of newly appearing multiple sclerosis lesions evolving into chronic active, slowly expanding lesions: A retrospective analysis. ''Eur J Neurol''. 2024 Jan; '''31''' (1):e16092
Respiratory motion modelling for MR-guided lung cancer radiotherapy: model development and geometric accuracy evaluation. Description: Eiben, Bjorn, et al. Respiratory motion modelling for MR-guided lung cancer radiotherapy: model development and geometric accuracy evaluation. ''Phys Med Biol''. 2024 Feb 19; '''69''' (5):
Independent component analysis (ICA) applied to dynamic oxygen-enhanced MRI (OE-MRI) for robust functional lung imaging at 3 T. Description: Needleman, Sarah H, et al. Independent component analysis (ICA) applied to dynamic oxygen-enhanced MRI (OE-MRI) for robust functional lung imaging at 3 T. ''Magn Reson Med''. 2024 Mar; '''91''' (3):955-971
Individualized white matter connectivity of the articulatory pathway: An ultra-high field study. Description: Lankinen, Kaisu, et al. Individualized white matter connectivity of the articulatory pathway: An ultra-high field study. ''Brain Lang''. 2024 Mar; '''250''': 105391
Photoreceptor Integrity in MEWDS: Longitudinal Structure-Function Correlations. Description: Cicinelli, Maria Vittoria, et al. Photoreceptor Integrity in MEWDS: Longitudinal Structure-Function Correlations. ''Invest Ophthalmol Vis Sci''. 2024 Apr 1; '''65''' (4):28
Three-dimensional histology reveals dissociable human hippocampal long-axis gradients of Alzheimer's pathology. Description: Ortega-Cruz, Diana, et al. Three-dimensional histology reveals dissociable human hippocampal long-axis gradients of Alzheimer's pathology. ''Alzheimers Dement''. 2024 Apr; '''20''' (4):2606-2619
Impact of amyloid and tau positivity on longitudinal brain atrophy in cognitively normal individuals. Description: Fujishima, Motonobu, et al. Impact of amyloid and tau positivity on longitudinal brain atrophy in cognitively normal individuals. ''Alzheimers Res Ther''. 2024 Apr 10; '''16''' (1):77
Regional nigral neuromelanin degeneration in asymptomatic leucine-rich repeat kinase 2 gene carrier using MRI. Description: Gao, Linlin, et al. Regional nigral neuromelanin degeneration in asymptomatic leucine-rich repeat kinase 2 gene carrier using MRI. ''Sci Rep''. 2024 May 9; '''14''' (1):10621
Improving explanation of motor disability with diffusion-based graph metrics at onset of the first demyelinating event. Description: Foster, Michael A, et al. Improving explanation of motor disability with diffusion-based graph metrics at onset of the first demyelinating event. ''Mult Scler''. 2024 Jun; '''30''' (7):800-811
Data-Driven Analysis Reveals Cortical Infarction Patterns Correlated With Inflammation and Prognosis: A Retrospective, Multicenter Cohort Study. Description: Wang, Wen-Jie, et al. Data-Driven Analysis Reveals Cortical Infarction Patterns Correlated With Inflammation and Prognosis: A Retrospective, Multicenter Cohort Study. ''J Am Heart Assoc''. 2024 Jun 18; '''13''' (12):e033616
Predicting Cognitive Functioning for Patients with a High-Grade Glioma: Evaluating Different Representations of Tumor Location in a Common Space. Description: Boelders, S M, et al. Predicting Cognitive Functioning for Patients with a High-Grade Glioma: Evaluating Different Representations of Tumor Location in a Common Space. ''Neuroinformatics''. 2024 Jul; '''22''' (3):329-352
A machine-learning regional clustering approach to understand ventilator-induced lung injury: a proof-of-concept experimental study. Description: Cruces, Pablo, et al. A machine-learning regional clustering approach to understand ventilator-induced lung injury: a proof-of-concept experimental study. ''Intensive Care Med Exp''. 2024 Jul 2; '''12''' (1):60
A next-generation, histological atlas of the human brain and its application to automated brain MRI segmentation. Description: Casamitjana, Adria, et al. A next-generation, histological atlas of the human brain and its application to automated brain MRI segmentation. ''bioRxiv''. 2024 Sep 6;
Resolving spatial response heterogeneity in glioblastoma. Description: Ziegenfeuter, Julian, et al. Resolving spatial response heterogeneity in glioblastoma. ''Eur J Nucl Med Mol Imaging''. 2024 Oct; '''51''' (12):3685-3695
Structure-function coupling changes in first-episode, treatment-naive schizophrenia correlate with cell type-specific transcriptional signature. Description: Yao, Guanqun, et al. Structure-function coupling changes in first-episode, treatment-naive schizophrenia correlate with cell type-specific transcriptional signature. ''BMC Med''. 2024 Oct 23; '''22''' (1):491
Portable, low-field magnetic resonance imaging for evaluation of Alzheimer's disease. Description: Sorby-Adams, Annabel J, et al. Portable, low-field magnetic resonance imaging for evaluation of Alzheimer's disease. ''Nat Commun''. 2024 Dec 2; '''15''' (1):10488