The links below are to publications on PubMed referring to Automatic Registration Toolbox. This list is gathered weekly from PubMed automatically.

Publication/References
Model-based automatic detection of the anterior and posterior commissures on MRI scans.
Description: Ardekani, Babak A, et al. Model-based automatic detection of the anterior and posterior commissures on MRI scans. ''Neuroimage''. 2009 Jul 1; '''46''' (3):677-82
Evaluation of volume-based and surface-based brain image registration methods.
Description: Klein, Arno, et al. Evaluation of volume-based and surface-based brain image registration methods. ''Neuroimage''. 2010 May 15; '''51''' (1):214-20
Improving intersubject image registration using tissue-class information benefits robustness and accuracy of multi-atlas based anatomical segmentation.
Description: Heckemann, Rolf A, et al. Improving intersubject image registration using tissue-class information benefits robustness and accuracy of multi-atlas based anatomical segmentation. ''Neuroimage''. 2010 May 15; '''51''' (1):221-7
Automatic morphometry in Alzheimer's disease and mild cognitive impairment.
Description: Heckemann, Rolf A, et al. Automatic morphometry in Alzheimer's disease and mild cognitive impairment. ''Neuroimage''. 2011 Jun 15; '''56''' (4):2024-37
ADHD classification by a texture analysis of anatomical brain MRI data.
Description: Chang, Che-Wei, et al. ADHD classification by a texture analysis of anatomical brain MRI data. ''Front Syst Neurosci''. 2012; '''6''': 66
Automated measurement of the human corpus callosum using MRI.
Description: Herron, Timothy J, et al. Automated measurement of the human corpus callosum using MRI. ''Front Neuroinform''. 2012; '''6''': 25
Toward in vivo histology: a comparison of quantitative susceptibility mapping (QSM) with magnitude-, phase-, and R2*-imaging at ultra-high magnetic field strength.
Description: Deistung, Andreas, et al. Toward in vivo histology: a comparison of quantitative susceptibility mapping (QSM) with magnitude-, phase-, and R2*-imaging at ultra-high magnetic field strength. ''Neuroimage''. 2013 Jan 15; '''65''': 299-314
Longitudinally guided level sets for consistent tissue segmentation of neonates.
Description: Wang, Li, et al. Longitudinally guided level sets for consistent tissue segmentation of neonates. ''Hum Brain Mapp''. 2013 Apr; '''34''' (4):956-72
Application of fused lasso logistic regression to the study of corpus callosum thickness in early Alzheimer's disease.
Description: Lee, Sang H, et al. Application of fused lasso logistic regression to the study of corpus callosum thickness in early Alzheimer's disease. ''J Neurosci Methods''. 2014 Jan 15; '''221''': 78-84
Selective reduction of cerebral cortex GABA neurons in a late gestation model of fetal alcohol spectrum disorder.
Description: Smiley, John F, et al. Selective reduction of cerebral cortex GABA neurons in a late gestation model of fetal alcohol spectrum disorder. ''Alcohol''. 2015 Sep; '''49''' (6):571-80
Inter-Method Discrepancies in Brain Volume Estimation May Drive Inconsistent Findings in Autism.
Description: Katuwal, Gajendra J, et al. Inter-Method Discrepancies in Brain Volume Estimation May Drive Inconsistent Findings in Autism. ''Front Neurosci''. 2016; '''10''': 439
Medial Prefrontal and Anterior Insular Connectivity in Early Schizophrenia and Major Depressive Disorder: A Resting Functional MRI Evaluation of Large-Scale Brain Network Models.
Description: Penner, Jacob, et al. Medial Prefrontal and Anterior Insular Connectivity in Early Schizophrenia and Major Depressive Disorder: A Resting Functional MRI Evaluation of Large-Scale Brain Network Models. ''Front Hum Neurosci''. 2016; '''10''': 132
Predicting progression from mild cognitive impairment to Alzheimer's disease using longitudinal callosal atrophy.
Description: Lee, Sang Han, et al. Predicting progression from mild cognitive impairment to Alzheimer's disease using longitudinal callosal atrophy. ''Alzheimers Dement (Amst)''. 2016; '''2''': 68-74
Accurate Learning with Few Atlases (ALFA): an algorithm for MRI neonatal brain extraction and comparison with 11 publicly available methods.
Description: Serag, Ahmed, et al. Accurate Learning with Few Atlases (ALFA): an algorithm for MRI neonatal brain extraction and comparison with 11 publicly available methods. ''Sci Rep''. 2016 Mar 24; '''6''': 23470
Middle Cerebellar Peduncle Width-A Novel MRI Biomarker for FXTAS?
Description: Shelton, Annie L, et al. Middle Cerebellar Peduncle Width-A Novel MRI Biomarker for FXTAS? ''Front Neurosci''. 2018; '''12''': 379
Temporoparietal Junction Functional Connectivity in Early Schizophrenia and Major Depressive Disorder.
Description: Penner, Jacob, et al. Temporoparietal Junction Functional Connectivity in Early Schizophrenia and Major Depressive Disorder. ''Chronic Stress (Thousand Oaks)''. 2018 Jan-Dec; '''2''': 2470547018815232
Interaction between ventricular expansion and structural changes in the corpus callosum and putamen in males with FMR1 normal and premutation alleles.
Description: Wang, Jun Yi, et al. Interaction between ventricular expansion and structural changes in the corpus callosum and putamen in males with FMR1 normal and premutation alleles. ''Neurobiol Aging''. 2020 Feb; '''86''': 27-38
Cortical gyrification and its relationships with molecular measures and cognition in children with the FMR1 premutation.
Description: Wang, Jun Yi, et al. Cortical gyrification and its relationships with molecular measures and cognition in children with the FMR1 premutation. ''Sci Rep''. 2020 Sep 29; '''10''' (1):16059
Metabolomic Biomarkers Are Associated With Area of the Pons in Fragile X Premutation Carriers at Risk for Developing FXTAS.
Description: Zafarullah, Marwa, et al. Metabolomic Biomarkers Are Associated With Area of the Pons in Fragile X Premutation Carriers at Risk for Developing FXTAS. ''Front Psychiatry''. 2021; '''12''': 691717
A new approach to symmetric registration of longitudinal structural MRI of the human brain.
Description: Ardekani, Babak A. A new approach to symmetric registration of longitudinal structural MRI of the human brain. ''J Neurosci Methods''. 2022 May 1; '''373''': 109563
A novel MRI-based quantitative water content atlas of the human brain.
Description: Shah, N Jon, et al. A novel MRI-based quantitative water content atlas of the human brain. ''Neuroimage''. 2022 May 15; '''252''': 119014
Impact of deformable registration methods for prediction of recurrence free survival response to neoadjuvant chemotherapy in breast cancer: Results from the ISPY 1/ACRIN 6657 trial.
Description: Thakran, Snekha, et al. Impact of deformable registration methods for prediction of recurrence free survival response to neoadjuvant chemotherapy in breast cancer: Results from the ISPY 1/ACRIN 6657 trial. ''Transl Oncol''. 2022 Jun; '''20''': 101411
Spectris treatment preserves corpus callosum structure in Alzheimer's disease.
Description: Da, Xiao, et al. Spectris treatment preserves corpus callosum structure in Alzheimer's disease. ''Front Neurol''. 2024; '''15''': 1452930