Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19194585
2
CONN : functional connectivity toolbox
2011923
3
1000 Functional Connectomes Project
1996863
4
MRIcron
1295628
5
JIST: Java Image Science Toolkit
888423
6
imcalc: Batch image calulations and transformations for SPM
724284
7
Computational Morphometry Toolkit (CMTK)
656237
8
BrainNet Viewer
650628
9
DTI-TK
635143
10
Vaa3D and Vaa3D-Neuron
617024
11
WFU_PickAtlas
553126
12
SPHARM-PDM Toolbox
488863
13
BioImage Suite
487797
14
Automatic Registration Toolbox
484799
15
GIFTI
443654
16
IBSR
399576
17
PANDA: a pipeline tool for diffusion MRI
395675
18
ABC (Atlas Based Classification)
394899
19
MRIcroGL
361488
20
Artifact Detection Tools (ART)
342253
21
DWI/DTI Quality Control Tool: DTIPrep
337467
22
NIfTI
308273
23
Diffusional Kurtosis Estimator
308226
24
Human Imaging Database (HID)
303799
25
Web Game for Collaborative Labeling
300456
26
3D Slicer
299147
27
The Neuro Bureau
292485
28
BXH/XCEDE Tools
289225
29
TOADS-CRUISE Brain Segmentation Tools
278686
30
BrainVisa Morphologist extensions
277554
31
SRI24 Atlas: Normal Adult Brain Anatomy
272175
32
Functional Imaging BIRN
269383
33
IIT Human Brain Atlas (v.5.0)
252200
34
HAMMER: Deformable Registration
251670
35
eConnectome
245366
36
GRETNA
243597
37
Generalized PPI Toolbox
241049
38
ARCTIC
240427
39
fMRI-CPCA
234450
40
Mango
231855
41
Conferences, Workshops and Meetings
228951
42
MRtrix
226386
43
PESTICA & SLOMOCO: physio and motion correction tools
225787
44
VMTK in 3D Slicer
224747
45
Hammer And WML Modules for 3D Slicer
221813
46
BrainVoyager Brain Tutor
221763
47
Network-Based Statistic (NBS)
221567
48
NeuroImaging Analysis Kit (NIAK)
220813
49
FSL
219590
50
BRAINSTools
218636
51
CANDI Neuroimaging Access Point
217174
52
FiberViewerLight
213360
53
Pipeline system for Octave and Matlab
213307
54
AFNI
213247
55
Brain Connectivity Toolbox
213158
56
Talairach Daemon
212548
57
AutoSeg
212410
58
DTIProcess ToolKit
210507
59
ITK-SNAP
210066
60
Diffusion Toolkit / TrackVis
206348
61
SPM
203288
62
REX
196553
63
Multi-Modal MRI Reproducibility Resource
196553
64
FBIRN Image Processing Scripts (FIPS)
195670
65
BrainMap Database
195065
66
DICOM_UploadGUI
193947
67
MRI Studio
192079
68
SnPM
188790
69
Camino
188574
70
SVV
186672
71
Maps4Mipav (Exploratory JIST)
186497
72
Spatially Constrained Parcellation
185851
73
NeuroDebian
185395
74
R-package for adaptive fMRI analysis
184583
75
3DSlicerLupusLesionModule
184463
76
BrainMask Volume Processing Tool
184020
77
dcm2nii
183910
78
DicomBrowser
183724
79
ASHS: Automatic Segmentation of Hippocampal Subfields
183380
80
XNAT
183224
81
Numerical Fibre Generator (NFG)
180975
82
Slicer3 Example Modules
180862
83
BASH4RfMRI
180770
84
xjView, a viewing tool for SPM
180299
85
JIP fMRI Analysis Toolkit
179854
86
GTRACT
179698
87
Grantees Meeting for NITRC
179636
88
MIView
179588
89
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
179266
90
LONI Debabeler
179103
91
FSL extensions
179030
92
N3 - MINC B0 nonuniformity correction
177813
93
Level-set Segmentation for Slicer3
177715
94
E-Prime
176533
95
Group ICA Toolbox (GIFT and EEGIFT)
174482
96
VAMCA Cortical Meta-analysis Toolbox
174310
97
Slicer3 Module Rician noise filter
173210
98
DTI Fiber Tract Statistics
173047
99
BrainVoyager Viewer
172475
100
BRAINSFit
172443