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help > RE: Loading conn files in SPM
Mar 14, 2016 06:03 PM | Alfonso Nieto-Castanon - Boston University
RE: Loading conn files in SPM
Dear Laurel,
The nifitDATA*.nii files contain just the same information as the DATA*.matc files in the same preprocessing directory, only in a more standard nifti format. Those nifti* files are only generated by CONN if you select in Setup.Options the option to 'create confound corrected timeseres', and they are meant to be used when you want to export those confound-corrected timeseries to a different program/software. The BETA_Subject* files in that same directory represent the beta weights (regressor coefficients) associated with the different confounding effects during the Denoising step. Again, these are only generated by CONN if you select in Setup.Options the option to 'create confound-effect beta maps', and they are meant to be used when you want to export those regression coefficients to a different program/software.
Hope this helps
Alfonso
Originally posted by laurel morris:
The nifitDATA*.nii files contain just the same information as the DATA*.matc files in the same preprocessing directory, only in a more standard nifti format. Those nifti* files are only generated by CONN if you select in Setup.Options the option to 'create confound corrected timeseres', and they are meant to be used when you want to export those confound-corrected timeseries to a different program/software. The BETA_Subject* files in that same directory represent the beta weights (regressor coefficients) associated with the different confounding effects during the Denoising step. Again, these are only generated by CONN if you select in Setup.Options the option to 'create confound-effect beta maps', and they are meant to be used when you want to export those regression coefficients to a different program/software.
Hope this helps
Alfonso
Originally posted by laurel morris:
Dear Alfonso, in response to this post, if you
have just one task/condition (rest), what is the difference between
the preprocessing/niftiDATA_Subject* data and
the preprocessing/BETA_Subject* data? I'm looking at time
course data before and after TMS. Many thanks for all your help,
Laurel
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| Title | Author | Date |
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| Leah Fleming | Nov 23, 2016 | |
| kito24 | Feb 7, 2017 | |
| Laila Franke | Dec 19, 2018 | |
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| Leah Fleming | Feb 8, 2017 | |
| Alfonso Nieto-Castanon | Jun 13, 2014 | |
| Chaleece Sandberg | Jul 31, 2015 | |
| Alfonso Nieto-Castanon | Aug 3, 2015 | |
| Chaleece Sandberg | Aug 5, 2015 | |
| Nole Hiebert | Aug 23, 2018 | |
| Alfonso Nieto-Castanon | Aug 6, 2015 | |
| Chaleece Sandberg | Aug 6, 2015 | |
| Chaleece Sandberg | Aug 6, 2015 | |
| Alfonso Nieto-Castanon | Aug 6, 2015 | |
| laurentcohen | Sep 14, 2018 | |
| Chaleece Sandberg | Oct 2, 2015 | |
| Alfonso Nieto-Castanon | Oct 8, 2015 | |
| kito24 | Feb 9, 2017 | |
| Ines Del Cerro | Nov 9, 2017 | |
| Patrick McConnell | Nov 3, 2017 | |
| Roger Beaty | Jan 26, 2015 | |
| Alfonso Nieto-Castanon | Jan 27, 2015 | |
| Roger Beaty | Jan 27, 2015 | |
| Alfonso Nieto-Castanon | Jan 29, 2015 | |
| laurel morris | Mar 11, 2016 | |
| Alfonso Nieto-Castanon | Mar 14, 2016 | |
| Isabel Berwian | Nov 28, 2016 | |
| Anila D'Mello | Nov 10, 2015 | |
| Roger Beaty | Jun 14, 2014 | |