help > RE: Preprocessing failure, problem writing header
Jan 23, 2019  07:01 PM | Or Duek
RE: Preprocessing failure, problem writing header
I revive this thread because I meet the same error. 
I'm working on a SLURM HPC. Up to now I had no issue at all. 
The msg I get is:
Done functional Direct Segmentation & Normalization (simultaneous Grey/White/CSF segmentation and MNI normalization)
Importing results to CONN project. Please wait...
saved /gpfs/ysm/project/oad4/connRuns/subject1253.0001190123131636073.dmat
Preparing functional Label current functional files as part of list of Secondary Datasets ("mni-space data" label). Please wait...
Performing functional Label current functional files as part of list of Secondary Datasets ("mni-space data" label). Please wait...
Done functional Label current functional files as part of list of Secondary Datasets ("mni-space data" label)
Importing results to CONN project. Please wait...
saved /gpfs/ysm/project/oad4/connRuns/subject1253.0001190123131636073.dmat
Preparing structural Center to (0,0,0) coordinates (translation). Please wait...
Performing structural Center to (0,0,0) coordinates (translation). Please wait...
Done structural Center to (0,0,0) coordinates (translation)
Importing results to CONN project. Please wait...
Structural centering translation x/y/z = [1.03630065917969 -22.6367492675781 -0.917098999023438] (Subject 1)
Structural centering translation x/y/z = [1.58317565917969 -22.5089416503906 -2.84763336181641] (Subject 1)
Error: Permission denied
There was a problem writing to the header of
"/gpfs/ysm/home/oad4/project/PTSD_KPE/Converted/kpe1253/kpe1253_scan2_pb1164_harpaz-rotem/MPRAGE/ckpe1253_t1_Sag_3D_MPRAGE.nii"
/gpfs/ysm/project/oad4/connRuns/subject1253.qlog/190123131636073/node.0001190123131636073.sh error
_NODE END_

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TitleAuthorDate
Jeremy Hogeveen May 12, 2016
Or Duek Jan 24, 2019
RE: Preprocessing failure, problem writing header
Or Duek Jan 23, 2019
Alfonso Nieto-Castanon May 13, 2016
Jeremy Hogeveen May 13, 2016
Alfonso Nieto-Castanon May 17, 2016
Jeremy Hogeveen May 19, 2016
Alfonso Nieto-Castanon May 19, 2016
Jeremy Hogeveen May 19, 2016
Alfonso Nieto-Castanon May 19, 2016
Jeremy Hogeveen May 19, 2016
Alfonso Nieto-Castanon May 20, 2016
Jeremy Hogeveen Jun 7, 2016