open-discussion
open-discussion > RE: [Error in ShapeAnalysisModule within Slicer3]
Jul 27, 2011 08:07 PM | Beatriz Paniagua
RE: [Error in ShapeAnalysisModule within Slicer3]
Hi Jeongsik,
Also there is something else to see: do you have all the *surfSPHARM.vtk values for all your population? That MeshMath error ocurrs if 1) the commandline modules are not in the path so the results are not computed, and then the MRML creation fails 2) the commandline modules work but the input data is wrong (i.e. wrong or convoluted topology in your inputs). Try to see that your whole population is computed ok and then re-run the module in Slicer to see whether or not the MRML can be created.
About the bms file you mention, is the BatchMake script that pipelines all the process in Slicer. You can just discard it because it is used in the intermediate steps of the computation.
Regards,
BEATRIZ
Also there is something else to see: do you have all the *surfSPHARM.vtk values for all your population? That MeshMath error ocurrs if 1) the commandline modules are not in the path so the results are not computed, and then the MRML creation fails 2) the commandline modules work but the input data is wrong (i.e. wrong or convoluted topology in your inputs). Try to see that your whole population is computed ok and then re-run the module in Slicer to see whether or not the MRML can be created.
About the bms file you mention, is the BatchMake script that pipelines all the process in Slicer. You can just discard it because it is used in the intermediate steps of the computation.
Regards,
BEATRIZ
Threaded View
| Title | Author | Date |
|---|---|---|
| Jeongsik Kim | Jul 27, 2011 | |
| Beatriz Paniagua | Jul 27, 2011 | |
| Jeongsik Kim | Jul 28, 2011 | |
| Beatriz Paniagua | Jul 29, 2011 | |
| Jeongsik Kim | Jul 28, 2011 | |