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Post DateHeadline
Dec 29, 2021 New manual
We have updated the manual to include recommended track density thresholds for generating masks of major white matter bundles (pages 22-23). Users can apply the recommended thresholds...
Sep 16, 2020 New, more user-friendly look-up tables for the WM labels
We have updated the look-up tables for the labels of the WM atlas (LUT_WM_0to1.txt and LUT_WM_0to255.txt). When using the old look-up tables in visualization software such as FSL and...
Jul 29, 2020 New files provide the length of fiber connections
New files providing the length of fiber connections of the IIT Human Brain Atlas have been added (IIT_WM_atlas_length.nii.gz and IIT_WM_atlas_length_256.nii.gz). These files demonstrate...
Apr 17, 2020 New regionconnect is now available
A new version of the regionconnect script is now available. The manual of the IIT Human Brain Atlas has also been updated to reflect the changes in regionconnect. All other files of...
Jul 20, 2019 New manual (July 20th 2019)`
The manual has been updated to include the names of the white matter bundles provided with the atlas.
Jul 9, 2019 Updates to version 5 of the IIT atlas are now available
Few updates to version 5 of the IIT atlas are now available. More specifically: 1) An updated manual which now includes a) an updated chapter on how to use the IIT atlas in TBSS, and...
May 14, 2019 Version 5.0 of the IIT Human Brain Atlas is here!
The new version of the IIT Human Brain Atlas (v.5.0) has been released! This version contains major updates of the gray and white matter atlas resources and structural templates. The...
Apr 30, 2019 IIT Brain Atlas is used in paper introducing a new dementia
The IIT Human Brain Atlas appears in Brain paper introducing a new devastating age-related brain disease: Limbic-predominant Age-related TDP-43 Encephalopathy (LATE). See paper in...
Jun 1, 2018 Join our team!
Two (2) Postdoctoral Fellow positions are now available at MRIIT. More details here: http://www.iit.edu/~mri/assets/img/main/...
Jun 1, 2018 IIT DTI template outperforms study-specific templates
A comprehensive evaluation of standardized and study specific diffusion tensor templates published in Neuroimage demonstrates that the DTI template of the IIT Human Brain Atlas (v.3.0)...
Dec 8, 2016 New study compares IIT DTI template to study-specific templ.
New study by Cabeen, Bastin & Laidlaw, Neuroimage 2017 (www.ncbi.nlm.nih.gov/pubmed/27847347) shows that the DTI template of the IIT Human Brain Atlas (v.4.1) has similar and in...
Nov 10, 2015 Very minor bug fixed in tbss scripts
A very minor bug was discovered and fixed in the following files: tbss_4_prestats_iit tbss_4_prestats_iit_256 tbss_non_FA_iit tbss_non_FA_iit_256 In the previous versions, the...
Oct 20, 2015 IIT Human Brain Atlas v.4.1 Released
Version 4.1 of the IIT Human Brain Atlas was released on 10/15/2015. The new version includes several improvements, few bug-fixes, and several new files, mainly related to the white...
May 29, 2015 IIT Human Brain Atlas v.4.0 Released
Version 4.0 of the IIT Human Brain Atlas was released on 5/15/2015. The newest additions to the atlas include probabilistic HARDI connectivity-based 4D white matter labels, as well...
Mar 3, 2015 IIT Human Brain Atlas v.3.2 Released
Version 3.2 of the IIT Human Brain Atlas was released on 3/1/15. The update concerns the files of the gray matter atlas only. In the previous version (v.3.1), the globus pallidus and...
Aug 14, 2014 IIT Human Brain Atlas v.3.1 Released
Version 3.1 of the IIT Human Brain Atlas contains new probabilistic gray matter atlases for both Desikan and Destrieux labels (FreeSurfer labels). Both gray matter atlases were built...
Jan 6, 2014 HOW TO update
The document "HOW TO register DTI data to the IIT Human Brain Atlas (v.3) using DTI-TK" has been revised. The new HOW TO document includes an extra step that combines the...
Oct 11, 2013 New HARDI template uploaded
A mismatch between the coordinate system of the HARDI template of the IIT Human Brain Atlas (v.3) and that of MRTRIX was discovered and corrected. The corrected files of the HARDI template...
Jul 23, 2013 The new HARDI brain template is now available
The new HARDI template of the IIT Human Brain Atlas (v.3) is now available for download. A description of the contents, as well as HOW-TO documents are provided in the "Docs"...
Jun 18, 2013 HOW-TO documents have been added
Step-by-step instructions have been added to the "Docs" section of the IIT Human Brain Atlas (v.3) explaining how to use the atlas for tensor-based spatial normalization using...
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