Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19194658
2
CONN : functional connectivity toolbox
2013249
3
1000 Functional Connectomes Project
1997021
4
MRIcron
1296050
5
JIST: Java Image Science Toolkit
888447
6
imcalc: Batch image calulations and transformations for SPM
724302
7
Computational Morphometry Toolkit (CMTK)
656277
8
BrainNet Viewer
650866
9
DTI-TK
635168
10
Vaa3D and Vaa3D-Neuron
617048
11
WFU_PickAtlas
553258
12
SPHARM-PDM Toolbox
488899
13
BioImage Suite
487831
14
Automatic Registration Toolbox
484818
15
GIFTI
443703
16
IBSR
399638
17
PANDA: a pipeline tool for diffusion MRI
395734
18
ABC (Atlas Based Classification)
394905
19
MRIcroGL
361863
20
Artifact Detection Tools (ART)
342331
21
DWI/DTI Quality Control Tool: DTIPrep
337494
22
NIfTI
308310
23
Diffusional Kurtosis Estimator
308252
24
Human Imaging Database (HID)
303813
25
Web Game for Collaborative Labeling
300460
26
3D Slicer
299162
27
The Neuro Bureau
292495
28
BXH/XCEDE Tools
289237
29
TOADS-CRUISE Brain Segmentation Tools
278704
30
BrainVisa Morphologist extensions
277577
31
SRI24 Atlas: Normal Adult Brain Anatomy
272197
32
Functional Imaging BIRN
269407
33
IIT Human Brain Atlas (v.5.0)
252246
34
HAMMER: Deformable Registration
251678
35
eConnectome
245389
36
GRETNA
243699
37
Generalized PPI Toolbox
241102
38
ARCTIC
240438
39
fMRI-CPCA
234487
40
Mango
231902
41
Conferences, Workshops and Meetings
228957
42
MRtrix
226403
43
PESTICA & SLOMOCO: physio and motion correction tools
225799
44
VMTK in 3D Slicer
224755
45
Hammer And WML Modules for 3D Slicer
221825
46
BrainVoyager Brain Tutor
221774
47
Network-Based Statistic (NBS)
221632
48
NeuroImaging Analysis Kit (NIAK)
220831
49
FSL
219623
50
BRAINSTools
218645
51
CANDI Neuroimaging Access Point
217204
52
FiberViewerLight
213382
53
Pipeline system for Octave and Matlab
213312
54
AFNI
213265
55
Brain Connectivity Toolbox
213224
56
Talairach Daemon
212574
57
AutoSeg
212426
58
DTIProcess ToolKit
210526
59
ITK-SNAP
210104
60
Diffusion Toolkit / TrackVis
206362
61
SPM
203315
62
Multi-Modal MRI Reproducibility Resource
196585
63
REX
196577
64
FBIRN Image Processing Scripts (FIPS)
195676
65
BrainMap Database
195078
66
DICOM_UploadGUI
193955
67
MRI Studio
192091
68
SnPM
188811
69
Camino
188580
70
SVV
186676
71
Maps4Mipav (Exploratory JIST)
186503
72
Spatially Constrained Parcellation
185869
73
NeuroDebian
185418
74
R-package for adaptive fMRI analysis
184592
75
3DSlicerLupusLesionModule
184470
76
BrainMask Volume Processing Tool
184026
77
dcm2nii
183985
78
DicomBrowser
183730
79
ASHS: Automatic Segmentation of Hippocampal Subfields
183414
80
XNAT
183230
81
Numerical Fibre Generator (NFG)
180981
82
Slicer3 Example Modules
180869
83
BASH4RfMRI
180774
84
xjView, a viewing tool for SPM
180313
85
JIP fMRI Analysis Toolkit
179884
86
GTRACT
179712
87
Grantees Meeting for NITRC
179638
88
MIView
179604
89
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
179299
90
LONI Debabeler
179108
91
FSL extensions
179031
92
N3 - MINC B0 nonuniformity correction
177825
93
Level-set Segmentation for Slicer3
177720
94
E-Prime
176538
95
Group ICA Toolbox (GIFT and EEGIFT)
174504
96
VAMCA Cortical Meta-analysis Toolbox
174316
97
Slicer3 Module Rician noise filter
173214
98
DTI Fiber Tract Statistics
173053
99
BrainVoyager Viewer
172480
100
BRAINSFit
172461