Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19205491
2
CONN : functional connectivity toolbox
2131037
3
1000 Functional Connectomes Project
2021999
4
MRIcron
1363442
5
JIST: Java Image Science Toolkit
891014
6
imcalc: Batch image calulations and transformations for SPM
726315
7
BrainNet Viewer
685617
8
Computational Morphometry Toolkit (CMTK)
662960
9
DTI-TK
638462
10
Vaa3D and Vaa3D-Neuron
619613
11
WFU_PickAtlas
566738
12
SPHARM-PDM Toolbox
493395
13
BioImage Suite
492441
14
Automatic Registration Toolbox
488780
15
GIFTI
450045
16
MRIcroGL
412297
17
IBSR
406554
18
PANDA: a pipeline tool for diffusion MRI
403696
19
ABC (Atlas Based Classification)
396287
20
Artifact Detection Tools (ART)
350752
21
DWI/DTI Quality Control Tool: DTIPrep
340936
22
Diffusional Kurtosis Estimator
312553
23
NIfTI
312388
24
Human Imaging Database (HID)
305654
25
3D Slicer
301164
26
Web Game for Collaborative Labeling
301103
27
The Neuro Bureau
293930
28
BXH/XCEDE Tools
291344
29
TOADS-CRUISE Brain Segmentation Tools
280701
30
BrainVisa Morphologist extensions
279453
31
SRI24 Atlas: Normal Adult Brain Anatomy
276449
32
Functional Imaging BIRN
273000
33
IIT Human Brain Atlas (v.5.0)
257318
34
GRETNA
256880
35
HAMMER: Deformable Registration
252811
36
eConnectome
250646
37
Generalized PPI Toolbox
245222
38
ARCTIC
241568
39
fMRI-CPCA
236875
40
Mango
236720
41
Network-Based Statistic (NBS)
231632
42
Conferences, Workshops and Meetings
229985
43
MRtrix
228237
44
PESTICA & SLOMOCO: physio and motion correction tools
227733
45
VMTK in 3D Slicer
225810
46
BrainVoyager Brain Tutor
223708
47
FSL
223372
48
NeuroImaging Analysis Kit (NIAK)
223296
49
Hammer And WML Modules for 3D Slicer
223080
50
BRAINSTools
220040
51
CANDI Neuroimaging Access Point
219691
52
Brain Connectivity Toolbox
219528
53
FiberViewerLight
216834
54
AFNI
215262
55
Talairach Daemon
214687
56
Pipeline system for Octave and Matlab
214234
57
AutoSeg
214018
58
ITK-SNAP
213377
59
DTIProcess ToolKit
212332
60
Diffusion Toolkit / TrackVis
208756
61
SPM
206380
62
Multi-Modal MRI Reproducibility Resource
201239
63
REX
199978
64
BrainMap Database
196834
65
FBIRN Image Processing Scripts (FIPS)
196681
66
DICOM_UploadGUI
194668
67
dcm2nii
193657
68
MRI Studio
193640
69
SnPM
189955
70
Camino
189651
71
Spatially Constrained Parcellation
188969
72
ASHS: Automatic Segmentation of Hippocampal Subfields
187947
73
NeuroDebian
187774
74
SVV
187420
75
Maps4Mipav (Exploratory JIST)
187072
76
3DSlicerLupusLesionModule
185367
77
R-package for adaptive fMRI analysis
185352
78
DicomBrowser
185193
79
BrainMask Volume Processing Tool
185043
80
XNAT
184326
81
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
183682
82
xjView, a viewing tool for SPM
183031
83
Numerical Fibre Generator (NFG)
181971
84
JIP fMRI Analysis Toolkit
181780
85
BASH4RfMRI
181573
86
Slicer3 Example Modules
181510
87
GTRACT
180802
88
MIView
180757
89
Grantees Meeting for NITRC
180286
90
LONI Debabeler
179769
91
FSL extensions
179590
92
N3 - MINC B0 nonuniformity correction
179454
93
Level-set Segmentation for Slicer3
178384
94
Group ICA Toolbox (GIFT and EEGIFT)
177793
95
E-Prime
177548
96
VAMCA Cortical Meta-analysis Toolbox
175659
97
DTI Fiber Tract Statistics
174604
98
FreeSurfer
174480
99
BRAINSFit
174275
100
Slicer3 Module Rician noise filter
173883