Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19198407
2
CONN : functional connectivity toolbox
2055454
3
1000 Functional Connectomes Project
2004268
4
MRIcron
1318343
5
JIST: Java Image Science Toolkit
889485
6
imcalc: Batch image calulations and transformations for SPM
725021
7
BrainNet Viewer
663111
8
Computational Morphometry Toolkit (CMTK)
658564
9
DTI-TK
636356
10
Vaa3D and Vaa3D-Neuron
617970
11
WFU_PickAtlas
558082
12
SPHARM-PDM Toolbox
490541
13
BioImage Suite
489686
14
Automatic Registration Toolbox
486300
15
GIFTI
446016
16
IBSR
402284
17
PANDA: a pipeline tool for diffusion MRI
398618
18
ABC (Atlas Based Classification)
395519
19
MRIcroGL
378367
20
Artifact Detection Tools (ART)
345470
21
DWI/DTI Quality Control Tool: DTIPrep
338887
22
Diffusional Kurtosis Estimator
309763
23
NIfTI
309550
24
Human Imaging Database (HID)
304381
25
Web Game for Collaborative Labeling
300735
26
3D Slicer
299834
27
The Neuro Bureau
292959
28
BXH/XCEDE Tools
290004
29
TOADS-CRUISE Brain Segmentation Tools
279458
30
BrainVisa Morphologist extensions
278395
31
SRI24 Atlas: Normal Adult Brain Anatomy
273859
32
Functional Imaging BIRN
270752
33
IIT Human Brain Atlas (v.5.0)
254107
34
HAMMER: Deformable Registration
252134
35
GRETNA
248390
36
eConnectome
246582
37
Generalized PPI Toolbox
242691
38
ARCTIC
240928
39
fMRI-CPCA
235406
40
Mango
233782
41
Conferences, Workshops and Meetings
229415
42
MRtrix
227120
43
PESTICA & SLOMOCO: physio and motion correction tools
226388
44
Network-Based Statistic (NBS)
225359
45
VMTK in 3D Slicer
225162
46
BrainVoyager Brain Tutor
222450
47
Hammer And WML Modules for 3D Slicer
222360
48
NeuroImaging Analysis Kit (NIAK)
221758
49
FSL
220890
50
BRAINSTools
219175
51
CANDI Neuroimaging Access Point
218020
52
Brain Connectivity Toolbox
215592
53
FiberViewerLight
214761
54
AFNI
214071
55
Pipeline system for Octave and Matlab
213649
56
Talairach Daemon
213301
57
AutoSeg
213123
58
ITK-SNAP
211432
59
DTIProcess ToolKit
211291
60
Diffusion Toolkit / TrackVis
207144
61
SPM
204435
62
Multi-Modal MRI Reproducibility Resource
197905
63
REX
197884
64
FBIRN Image Processing Scripts (FIPS)
196000
65
BrainMap Database
195711
66
DICOM_UploadGUI
194315
67
MRI Studio
192670
68
SnPM
189232
69
Camino
189004
70
dcm2nii
187557
71
SVV
186973
72
Spatially Constrained Parcellation
186798
73
Maps4Mipav (Exploratory JIST)
186763
74
NeuroDebian
186340
75
ASHS: Automatic Segmentation of Hippocampal Subfields
184979
76
R-package for adaptive fMRI analysis
184937
77
3DSlicerLupusLesionModule
184799
78
BrainMask Volume Processing Tool
184426
79
DicomBrowser
184415
80
XNAT
183598
81
Numerical Fibre Generator (NFG)
181348
82
xjView, a viewing tool for SPM
181266
83
Slicer3 Example Modules
181138
84
BASH4RfMRI
181105
85
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
181071
86
JIP fMRI Analysis Toolkit
180606
87
GTRACT
180211
88
MIView
180041
89
Grantees Meeting for NITRC
179872
90
LONI Debabeler
179324
91
FSL extensions
179262
92
N3 - MINC B0 nonuniformity correction
178514
93
Level-set Segmentation for Slicer3
178010
94
E-Prime
176916
95
Group ICA Toolbox (GIFT and EEGIFT)
175592
96
VAMCA Cortical Meta-analysis Toolbox
174797
97
DTI Fiber Tract Statistics
173675
98
Slicer3 Module Rician noise filter
173492
99
BRAINSFit
173135
100
FreeSurfer
173008