Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19208855
2
CONN : functional connectivity toolbox
2330926
3
1000 Functional Connectomes Project
2036953
4
MRIcron
1396137
5
JIST: Java Image Science Toolkit
892181
6
imcalc: Batch image calulations and transformations for SPM
727193
7
BrainNet Viewer
703636
8
Computational Morphometry Toolkit (CMTK)
665918
9
DTI-TK
639938
10
Vaa3D and Vaa3D-Neuron
621150
11
WFU_PickAtlas
571992
12
SPHARM-PDM Toolbox
495132
13
BioImage Suite
494343
14
Automatic Registration Toolbox
490510
15
GIFTI
453131
16
MRIcroGL
440250
17
IBSR
409687
18
PANDA: a pipeline tool for diffusion MRI
407284
19
ABC (Atlas Based Classification)
396844
20
Artifact Detection Tools (ART)
355244
21
DWI/DTI Quality Control Tool: DTIPrep
342255
22
Diffusional Kurtosis Estimator
314321
23
NIfTI
314179
24
Human Imaging Database (HID)
306609
25
3D Slicer
302173
26
Web Game for Collaborative Labeling
301428
27
The Neuro Bureau
294641
28
BXH/XCEDE Tools
292236
29
TOADS-CRUISE Brain Segmentation Tools
281523
30
BrainVisa Morphologist extensions
280209
31
SRI24 Atlas: Normal Adult Brain Anatomy
278557
32
Functional Imaging BIRN
274593
33
GRETNA
263277
34
IIT Human Brain Atlas (v.5.0)
259556
35
eConnectome
254195
36
HAMMER: Deformable Registration
253388
37
Generalized PPI Toolbox
247083
38
ARCTIC
241978
39
Mango
238736
40
fMRI-CPCA
237822
41
Network-Based Statistic (NBS)
236514
42
Conferences, Workshops and Meetings
230386
43
MRtrix
229129
44
PESTICA & SLOMOCO: physio and motion correction tools
228634
45
VMTK in 3D Slicer
226276
46
FSL
225184
47
BrainVoyager Brain Tutor
224827
48
NeuroImaging Analysis Kit (NIAK)
224403
49
Hammer And WML Modules for 3D Slicer
223678
50
Brain Connectivity Toolbox
222538
51
CANDI Neuroimaging Access Point
221040
52
BRAINSTools
220600
53
FiberViewerLight
217490
54
AFNI
216017
55
Talairach Daemon
215727
56
ITK-SNAP
215066
57
Pipeline system for Octave and Matlab
214748
58
AutoSeg
214677
59
DTIProcess ToolKit
213035
60
Diffusion Toolkit / TrackVis
209843
61
SPM
207711
62
Multi-Modal MRI Reproducibility Resource
203036
63
REX
201371
64
dcm2nii
198141
65
BrainMap Database
197789
66
FBIRN Image Processing Scripts (FIPS)
197220
67
DICOM_UploadGUI
195020
68
MRI Studio
194254
69
Spatially Constrained Parcellation
190599
70
ASHS: Automatic Segmentation of Hippocampal Subfields
190547
71
SnPM
190507
72
Camino
190230
73
NeuroDebian
189581
74
SVV
187791
75
Maps4Mipav (Exploratory JIST)
187296
76
DicomBrowser
185964
77
3DSlicerLupusLesionModule
185825
78
R-package for adaptive fMRI analysis
185752
79
BrainMask Volume Processing Tool
185548
80
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
185362
81
XNAT
184948
82
xjView, a viewing tool for SPM
184202
83
JIP fMRI Analysis Toolkit
182662
84
Numerical Fibre Generator (NFG)
182483
85
BASH4RfMRI
181936
86
Slicer3 Example Modules
181776
87
MIView
181421
88
GTRACT
181269
89
Grantees Meeting for NITRC
180580
90
LONI Debabeler
180131
91
N3 - MINC B0 nonuniformity correction
180117
92
FSL extensions
179774
93
Group ICA Toolbox (GIFT and EEGIFT)
179431
94
Level-set Segmentation for Slicer3
178615
95
E-Prime
178226
96
VAMCA Cortical Meta-analysis Toolbox
176258
97
FreeSurfer
175896
98
DTI Fiber Tract Statistics
175219
99
BRAINSFit
175213
100
ASL data processing tool box
174660